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Chlorine in PDB 3l0i: Complex Structure of Sidm/Drra with the Wild Type RAB1

Protein crystallography data

The structure of Complex Structure of Sidm/Drra with the Wild Type RAB1, PDB code: 3l0i was solved by Y.Zhu, F.Shao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.94 / 2.85
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 63.808, 71.747, 146.911, 90.00, 93.62, 90.00
R / Rfree (%) 22.6 / 26.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Complex Structure of Sidm/Drra with the Wild Type RAB1 (pdb code 3l0i). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Complex Structure of Sidm/Drra with the Wild Type RAB1, PDB code: 3l0i:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3l0i

Go back to Chlorine Binding Sites List in 3l0i
Chlorine binding site 1 out of 2 in the Complex Structure of Sidm/Drra with the Wild Type RAB1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Complex Structure of Sidm/Drra with the Wild Type RAB1 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl551

b:65.0
occ:1.00
CD2 C:HIS307 3.9 40.3 1.0
CG C:HIS307 4.8 40.2 1.0
NE2 C:HIS307 4.8 40.6 1.0
CE1 C:HIS314 4.9 49.9 1.0
CB C:HIS307 5.0 40.1 1.0

Chlorine binding site 2 out of 2 in 3l0i

Go back to Chlorine Binding Sites List in 3l0i
Chlorine binding site 2 out of 2 in the Complex Structure of Sidm/Drra with the Wild Type RAB1


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Complex Structure of Sidm/Drra with the Wild Type RAB1 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl2

b:52.3
occ:1.00
NH2 C:ARG276 3.0 30.5 1.0
OG C:SER270 3.8 36.5 1.0
CZ C:ARG276 4.3 30.7 1.0
N C:GLY273 4.8 30.1 1.0
CA C:GLY273 4.9 29.6 1.0

Reference:

Y.Zhu, L.Hu, Y.Zhou, Q.Yao, L.Liu, F.Shao. Structural Mechanism of Host RAB1 Activation By the Bifunctional Legionella Type IV Effector Sidm/Drra Proc.Natl.Acad.Sci.Usa V. 107 4699 2010.
ISSN: ISSN 0027-8424
PubMed: 20176951
DOI: 10.1073/PNAS.0914231107
Page generated: Sat Jul 20 22:59:23 2024

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