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Chlorine in PDB 3lk7: The Crystal Structure of Udp-N-Acetylmuramoylalanine-D-Glutamate (Murd) Ligase From Streptococcus Agalactiae to 1.5A

Enzymatic activity of The Crystal Structure of Udp-N-Acetylmuramoylalanine-D-Glutamate (Murd) Ligase From Streptococcus Agalactiae to 1.5A

All present enzymatic activity of The Crystal Structure of Udp-N-Acetylmuramoylalanine-D-Glutamate (Murd) Ligase From Streptococcus Agalactiae to 1.5A:
6.3.2.9;

Protein crystallography data

The structure of The Crystal Structure of Udp-N-Acetylmuramoylalanine-D-Glutamate (Murd) Ligase From Streptococcus Agalactiae to 1.5A, PDB code: 3lk7 was solved by A.J.Stein, A.Sather, G.Shakelford, A.Joachimiak, Midwest Center Forstructural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.50
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 161.539, 65.045, 52.889, 90.00, 107.52, 90.00
R / Rfree (%) 18.7 / 20.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Crystal Structure of Udp-N-Acetylmuramoylalanine-D-Glutamate (Murd) Ligase From Streptococcus Agalactiae to 1.5A (pdb code 3lk7). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the The Crystal Structure of Udp-N-Acetylmuramoylalanine-D-Glutamate (Murd) Ligase From Streptococcus Agalactiae to 1.5A, PDB code: 3lk7:

Chlorine binding site 1 out of 1 in 3lk7

Go back to Chlorine Binding Sites List in 3lk7
Chlorine binding site 1 out of 1 in the The Crystal Structure of Udp-N-Acetylmuramoylalanine-D-Glutamate (Murd) Ligase From Streptococcus Agalactiae to 1.5A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Crystal Structure of Udp-N-Acetylmuramoylalanine-D-Glutamate (Murd) Ligase From Streptococcus Agalactiae to 1.5A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl454

b:21.4
occ:1.00
 O A:HOH641 3.2 40.5 1.0
O A:HOH524 3.2 24.7 1.0
NH2 A:ARG19 3.3 19.1 1.0
NE1 A:TRP428 3.3 19.4 1.0
N A:PHE434 3.4 18.9 1.0
CB A:ASN433 3.5 20.7 1.0
CA A:ASN433 3.6 20.4 1.0
CD2 A:PHE434 3.7 23.2 1.0
CG A:ARG19 3.9 20.0 1.0
CD A:ARG19 3.9 19.5 1.0
C A:ASN433 4.0 19.3 1.0
CE2 A:TRP428 4.0 19.5 1.0
CB A:ARG19 4.1 19.0 1.0
CZ2 A:TRP428 4.1 21.0 1.0
CB A:PHE434 4.3 18.8 1.0
CD1 A:TRP428 4.4 20.5 1.0
CZ A:ARG19 4.4 20.9 1.0
CG A:PHE434 4.4 20.2 1.0
CA A:PHE434 4.5 18.1 1.0
CE2 A:PHE434 4.5 24.5 1.0
CA A:ARG19 4.6 19.2 1.0
OE1 A:GLU435 4.6 29.9 1.0
NE A:ARG19 4.6 19.5 1.0
OG A:SER427 4.6 19.6 1.0
O A:HOH611 4.6 34.2 1.0
O A:LYS432 4.7 22.2 1.0
O A:HOH691 4.8 36.7 1.0
N A:ASN433 4.8 19.8 1.0
O A:HOH794 4.9 35.5 1.0
CG A:ASN433 5.0 25.8 1.0

Reference:

A.J.Stein, A.Sather, G.Shakelford, A.Joachimiak. The Crystal Structure of Udp-N-Acetylmuramoylalanine-D-Glutamate (Murd) Ligase From Streptococcus Agalactiae to 1.5A To Be Published.
Page generated: Fri Jul 11 07:28:40 2025

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