Atomistry » Chlorine » PDB 3lnz-3lz0 » 3lor
Atomistry »
  Chlorine »
    PDB 3lnz-3lz0 »
      3lor »

Chlorine in PDB 3lor: The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A

Protein crystallography data

The structure of The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A, PDB code: 3lor was solved by A.J.Stein, J.Osipiuk, A.Weger, G.Cobb, A.Joachimiak, Midwest Center Forstructural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.40 / 2.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 78.190, 78.892, 124.229, 90.00, 90.00, 90.00
R / Rfree (%) 21.2 / 25.9

Other elements in 3lor:

The structure of The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A (pdb code 3lor). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A, PDB code: 3lor:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in 3lor

Go back to Chlorine Binding Sites List in 3lor
Chlorine binding site 1 out of 5 in the The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl161

b:31.8
occ:1.00
 N A:LYS95 3.0 12.7 1.0
NH2 A:ARG58 3.4 22.9 1.0
OE1 A:GLN54 3.5 15.3 1.0
CB A:GLN54 3.6 11.8 1.0
CZ A:ARG58 3.6 23.3 1.0
CD2 A:HIS57 3.6 12.1 1.0
CG A:GLN54 3.7 13.3 1.0
O A:GLY93 3.7 12.2 1.0
NH1 A:ARG58 3.7 24.4 1.0
CB A:LYS95 3.8 12.6 1.0
CA A:ILE94 3.9 12.7 1.0
CA A:LYS95 3.9 13.1 1.0
CA A:GLN54 3.9 12.2 1.0
C A:ILE94 3.9 12.8 1.0
CD1 A:PHE96 3.9 10.4 1.0
CD A:GLN54 4.0 14.3 1.0
N A:PHE96 4.1 12.1 1.0
CG A:HIS57 4.3 12.2 1.0
NE A:ARG58 4.3 21.9 1.0
CE1 A:PHE96 4.4 9.3 1.0
C A:LYS95 4.4 13.0 1.0
O A:GLN54 4.5 12.2 1.0
NE2 A:HIS57 4.5 12.9 1.0
CB A:HIS57 4.5 11.0 1.0
C A:GLY93 4.6 12.4 1.0
CG A:LYS95 4.6 13.7 1.0
C A:GLN54 4.7 12.4 1.0
N A:ILE94 4.7 12.6 1.0
CG2 A:ILE94 4.8 13.0 1.0
CB A:ILE94 4.8 13.0 1.0
CG A:PHE96 4.9 10.7 1.0
CG A:ARG58 4.9 16.1 1.0
CD A:LYS95 4.9 17.8 1.0
N A:GLN54 5.0 11.9 1.0

Chlorine binding site 2 out of 5 in 3lor

Go back to Chlorine Binding Sites List in 3lor
Chlorine binding site 2 out of 5 in the The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl161

b:29.5
occ:1.00
 N B:LYS95 3.0 12.6 1.0
CG B:GLN54 3.6 12.1 1.0
OE1 B:GLN54 3.6 12.8 1.0
CB B:GLN54 3.7 12.0 1.0
CB B:LYS95 3.7 12.7 1.0
CD2 B:HIS57 3.7 4.3 1.0
CA B:LYS95 3.8 12.9 1.0
C B:ILE94 3.9 13.2 1.0
O B:GLY93 3.9 12.1 1.0
CA B:GLN54 3.9 12.1 1.0
CA B:ILE94 3.9 12.4 1.0
CD1 B:PHE96 4.0 10.1 1.0
CD B:GLN54 4.1 13.9 1.0
CG B:LYS95 4.1 15.2 1.0
N B:PHE96 4.1 11.4 1.0
CE1 B:PHE96 4.3 11.3 1.0
O B:GLN54 4.4 12.0 1.0
CG B:HIS57 4.4 4.5 1.0
C B:LYS95 4.5 12.7 1.0
CB B:HIS57 4.5 5.7 1.0
C B:GLN54 4.6 12.2 1.0
NE2 B:HIS57 4.7 5.4 1.0
C B:GLY93 4.7 12.2 1.0
CG2 B:ILE94 4.8 11.0 1.0
N B:ILE94 4.8 12.3 1.0
CB B:ILE94 4.9 12.9 1.0
CG B:PHE96 4.9 10.5 1.0
O B:ILE94 5.0 14.3 1.0

Chlorine binding site 3 out of 5 in 3lor

Go back to Chlorine Binding Sites List in 3lor
Chlorine binding site 3 out of 5 in the The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl161

b:50.3
occ:1.00
 N C:LYS95 3.1 13.3 1.0
OE1 C:GLN54 3.5 12.9 1.0
CB C:GLN54 3.6 13.7 1.0
ND1 C:HIS57 3.7 15.7 1.0
CG C:GLN54 3.7 13.5 1.0
CB C:LYS95 3.8 13.5 1.0
NH1 C:ARG58 3.8 19.8 1.0
CA C:GLN54 3.9 14.3 1.0
NE C:ARG58 3.9 19.2 1.0
O C:GLY93 3.9 13.8 1.0
CA C:ILE94 3.9 13.5 1.0
CZ C:ARG58 3.9 19.7 1.0
CA C:LYS95 3.9 13.3 1.0
CD1 C:PHE96 4.0 13.2 1.0
C C:ILE94 4.0 13.4 1.0
CD C:GLN54 4.0 13.4 1.0
N C:PHE96 4.2 13.2 1.0
CE1 C:PHE96 4.3 12.1 1.0
CG C:LYS95 4.3 13.7 1.0
CE1 C:HIS57 4.5 16.2 1.0
O C:GLN54 4.5 14.8 1.0
C C:LYS95 4.5 13.6 1.0
C C:GLN54 4.6 14.8 1.0
CG C:HIS57 4.7 16.0 1.0
CD C:ARG58 4.7 18.9 1.0
NH2 C:ARG58 4.7 19.4 1.0
C C:GLY93 4.7 13.8 1.0
CG2 C:ILE94 4.7 13.0 1.0
CB C:HIS57 4.8 15.9 1.0
CB C:ILE94 4.8 13.8 1.0
N C:ILE94 4.8 13.5 1.0
CG C:PHE96 4.9 13.1 1.0
CG C:ARG58 5.0 18.1 1.0
CD C:LYS95 5.0 16.1 1.0

Chlorine binding site 4 out of 5 in 3lor

Go back to Chlorine Binding Sites List in 3lor
Chlorine binding site 4 out of 5 in the The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl161

b:33.4
occ:1.00
 N D:LYS95 3.2 13.3 1.0
CG D:GLN54 3.5 14.0 1.0
NE2 D:GLN54 3.5 14.1 1.0
CD2 D:HIS57 3.6 13.9 1.0
CB D:GLN54 3.8 15.6 1.0
CA D:GLN54 3.9 14.9 1.0
CB D:LYS95 3.9 14.1 1.0
CD1 D:PHE96 4.0 10.0 1.0
CA D:ILE94 4.0 13.1 1.0
O D:GLY93 4.0 12.2 1.0
CA D:LYS95 4.0 14.0 1.0
CD D:GLN54 4.0 15.7 1.0
C D:ILE94 4.1 13.4 1.0
N D:PHE96 4.2 13.9 1.0
CG D:LYS95 4.2 14.9 1.0
CE1 D:PHE96 4.3 9.8 1.0
CG D:HIS57 4.3 13.8 1.0
O D:GLN54 4.3 15.2 1.0
CD D:LYS95 4.5 16.6 1.0
NE2 D:HIS57 4.5 12.7 1.0
C D:LYS95 4.5 14.3 1.0
CB D:HIS57 4.5 14.0 1.0
C D:GLN54 4.6 15.2 1.0
CG2 D:ILE94 4.8 11.8 1.0
C D:GLY93 4.8 12.6 1.0
CB D:ILE94 4.9 13.3 1.0
CG D:PHE96 4.9 11.1 1.0
N D:ILE94 4.9 13.0 1.0
CG D:ARG58 5.0 17.0 1.0

Chlorine binding site 5 out of 5 in 3lor

Go back to Chlorine Binding Sites List in 3lor
Chlorine binding site 5 out of 5 in the The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl162

b:59.3
occ:1.00
 O D:GLN107 3.1 18.0 1.0
N D:ARG104 3.1 14.0 1.0
O D:ILE109 3.3 17.4 1.0
CA D:PRO103 3.4 14.2 1.0
C D:ILE109 3.4 17.6 1.0
CA D:PRO110 3.5 16.8 1.0
N D:PRO110 3.5 17.1 1.0
CB D:PRO103 3.6 14.5 1.0
O D:ARG108 3.6 18.2 1.0
O D:ARG104 3.7 14.8 1.0
C D:PRO103 3.8 14.0 1.0
CB D:PRO110 3.9 17.4 1.0
C D:ARG108 3.9 18.1 1.0
C D:GLN107 4.0 17.9 1.0
CD D:PRO110 4.1 16.8 1.0
CA D:ARG104 4.2 14.3 1.0
N D:ILE109 4.3 17.6 1.0
CA D:ILE109 4.3 17.6 1.0
C D:ARG104 4.4 14.7 1.0
CB D:ARG104 4.5 14.0 1.0
CG D:PRO110 4.6 16.9 1.0
CB D:GLN107 4.6 17.9 1.0
CA D:ARG108 4.7 18.2 1.0
N D:PRO103 4.7 14.2 1.0
N D:ARG108 4.7 18.1 1.0
C D:PRO110 4.8 16.9 1.0
CA D:GLN107 4.9 17.9 1.0
O D:PRO103 5.0 13.9 1.0
CG D:PRO103 5.0 14.3 1.0
O D:MSE102 5.0 13.7 1.0

Reference:

A.J.Stein, J.Osipiuk, A.Weger, G.Cobb, A.Joachimiak. The Crystal Structure of A Thiol-Disulfide Isomerase From Corynebacterium Glutamicum to 2.2A To Be Published.
Page generated: Fri Jul 11 07:31:46 2025

Last articles

Ir in 7ONV
Ir in 7KGA
Ir in 7OAV
Ir in 7OA3
Ir in 7ONM
Ir in 7JJU
Ir in 7LYJ
Ir in 7M3V
Ir in 7EMM
Ir in 7KVT
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy