Chlorine in PDB 3mdo: Crystal Structure of A Putative Phosphoribosylformylglycinamidine Cyclo-Ligase (BDI_2101) From Parabacteroides Distasonis Atcc 8503 at 1.91 A Resolution

The structure of Crystal Structure of A Putative Phosphoribosylformylglycinamidine Cyclo-Ligase (BDI_2101) From Parabacteroides Distasonis Atcc 8503 at 1.91 A Resolution, PDB code: 3mdo was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.62 / 1.91
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	99.945, 99.945, 163.020, 90.00, 90.00, 90.00
R / Rfree (%)	15.4 / 19

The structure of Crystal Structure of A Putative Phosphoribosylformylglycinamidine Cyclo-Ligase (BDI_2101) From Parabacteroides Distasonis Atcc 8503 at 1.91 A Resolution also contains other interesting chemical elements:

Arsenic	(As)	1 atom
Calcium	(Ca)	7 atoms

The binding sites of Chlorine atom in the Crystal Structure of A Putative Phosphoribosylformylglycinamidine Cyclo-Ligase (BDI_2101) From Parabacteroides Distasonis Atcc 8503 at 1.91 A Resolution (pdb code 3mdo). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Crystal Structure of A Putative Phosphoribosylformylglycinamidine Cyclo-Ligase (BDI_2101) From Parabacteroides Distasonis Atcc 8503 at 1.91 A Resolution, PDB code: 3mdo:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in the Crystal Structure of A Putative Phosphoribosylformylglycinamidine Cyclo-Ligase (BDI_2101) From Parabacteroides Distasonis Atcc 8503 at 1.91 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Putative Phosphoribosylformylglycinamidine Cyclo-Ligase (BDI_2101) From Parabacteroides Distasonis Atcc 8503 at 1.91 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl393 b:39.0 occ:1.00 N A:GLY151 3.1 18.8 1.0 N A:LYS111 3.2 22.6 1.0 CB A:LYS111 3.6 26.3 1.0 CA A:GLY151 3.6 19.6 1.0 C A:ASP149 3.8 22.6 1.0 N A:VAL150 3.8 21.9 1.0 CB A:ASP149 3.9 20.7 1.0 O A:ARG109 3.9 23.3 1.0 CA A:LYS111 4.0 27.2 1.0 CA A:ASP149 4.1 22.1 1.0 C A:ASN110 4.1 21.3 1.0 CA A:ASN110 4.1 20.1 1.0 O A:ASP149 4.1 23.9 1.0 C A:VAL150 4.2 19.4 1.0 O B:HOH550 4.3 34.3 1.0 O A:HOH463 4.4 20.9 1.0 CA A:VAL150 4.4 19.9 1.0 O A:HOH536 4.5 29.6 1.0 O A:HOH459 4.6 32.9 1.0 OD1 A:ASN110 4.6 30.8 1.0 N A:LEU112 4.7 25.3 1.0 C A:ARG109 4.8 20.6 1.0 CG A:ASP149 4.8 29.9 1.0 C A:LYS111 4.9 26.2 1.0 N A:ASN110 4.9 22.2 1.0 C A:GLY151 5.0 20.6 1.0

Chlorine binding site 2 out of 4 in the Crystal Structure of A Putative Phosphoribosylformylglycinamidine Cyclo-Ligase (BDI_2101) From Parabacteroides Distasonis Atcc 8503 at 1.91 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Putative Phosphoribosylformylglycinamidine Cyclo-Ligase (BDI_2101) From Parabacteroides Distasonis Atcc 8503 at 1.91 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl394 b:37.5 occ:1.00 O A:HOH629 2.8 38.1 1.0 O A:HOH606 3.0 50.4 1.0 O A:HOH451 3.0 31.6 1.0 ND2 A:ASN335 3.1 20.7 1.0 N A:ASN335 3.4 22.7 1.0 CB A:ASN335 3.6 24.6 1.0 O A:MSE203 3.7 25.4 0.5 CG A:ASN335 3.8 21.3 1.0 O A:CYS287 4.0 24.0 1.0 CA A:ASN335 4.0 22.9 1.0 CD A:ARG339 4.1 26.1 1.0 CB A:ASN206 4.1 24.9 1.0 C A:PHE334 4.2 21.8 1.0 OD1 A:ASN206 4.3 34.7 1.0 CA A:PHE334 4.3 23.2 1.0 CG A:ARG339 4.3 22.5 1.0 N A:GLY204 4.3 26.5 0.5 CA A:GLY204 4.5 26.4 1.0 O A:VAL333 4.5 22.9 1.0 O A:SER288 4.5 23.4 0.5 N A:ASN206 4.7 25.8 1.0 CG A:ASN206 4.7 35.2 1.0 C A:MSE203 4.7 25.3 0.5 O A:ASN206 4.7 24.6 1.0 CA A:SER288 4.9 25.0 1.0 CA A:ASN206 4.9 25.6 1.0 OD1 A:ASN335 5.0 24.4 1.0

Chlorine binding site 3 out of 4 in the Crystal Structure of A Putative Phosphoribosylformylglycinamidine Cyclo-Ligase (BDI_2101) From Parabacteroides Distasonis Atcc 8503 at 1.91 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A Putative Phosphoribosylformylglycinamidine Cyclo-Ligase (BDI_2101) From Parabacteroides Distasonis Atcc 8503 at 1.91 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl392 b:41.9 occ:1.00 O B:HOH485 2.9 45.7 1.0 O B:HOH598 3.0 28.2 1.0 N B:GLY151 3.0 18.5 1.0 N B:LYS111 3.4 22.9 1.0 CA B:GLY151 3.6 18.4 1.0 N B:VAL150 3.6 22.1 1.0 C B:ASP149 3.6 25.4 1.0 CB B:ASP149 3.8 23.5 1.0 CG B:LYS111 3.8 30.3 1.0 O B:ARG109 3.8 22.6 1.0 CA B:ASP149 4.0 23.1 1.0 O B:ASP149 4.1 25.7 1.0 C B:VAL150 4.1 20.7 1.0 CB B:LYS111 4.1 26.4 1.0 CA B:ASN110 4.2 19.2 1.0 CA B:VAL150 4.3 20.6 1.0 C B:ASN110 4.3 20.4 1.0 O B:HOH516 4.3 37.0 1.0 CD B:LYS111 4.3 34.1 1.0 CA B:LYS111 4.3 26.6 1.0 O B:HOH494 4.4 25.7 1.0 CE B:LYS111 4.7 37.4 1.0 O B:HOH425 4.7 28.8 1.0 C B:ARG109 4.7 22.9 1.0 CG B:ASP149 4.8 28.4 1.0 O A:HOH535 4.8 30.7 1.0 C B:GLY151 4.9 19.1 1.0 N B:ASN110 4.9 21.3 1.0

Chlorine binding site 4 out of 4 in the Crystal Structure of A Putative Phosphoribosylformylglycinamidine Cyclo-Ligase (BDI_2101) From Parabacteroides Distasonis Atcc 8503 at 1.91 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of A Putative Phosphoribosylformylglycinamidine Cyclo-Ligase (BDI_2101) From Parabacteroides Distasonis Atcc 8503 at 1.91 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl393 b:37.3 occ:1.00 ND2 B:ASN335 3.1 21.6 1.0 O B:HOH435 3.1 33.9 1.0 O B:HOH503 3.2 28.9 1.0 N B:ASN335 3.3 22.4 1.0 CB B:ASN335 3.5 20.9 1.0 O B:MSE203 3.6 26.6 0.5 CG B:ASN335 3.8 27.1 1.0 CA B:ASN335 4.0 22.7 1.0 O B:CYS287 4.0 25.7 1.0 C B:PHE334 4.1 26.4 1.0 CD B:ARG339 4.2 26.4 1.0 CA B:PHE334 4.2 24.7 1.0 N B:GLY204 4.3 27.5 0.5 CG B:ARG339 4.3 25.3 1.0 O B:SER288 4.4 29.9 0.5 CB B:ASN206 4.4 29.5 1.0 O B:VAL333 4.4 22.8 1.0 CA B:GLY204 4.5 27.9 1.0 OD1 B:ASN206 4.5 31.7 1.0 C B:MSE203 4.7 26.2 0.5 N B:ASN206 4.8 26.7 1.0 CA B:SER288 4.9 30.1 1.0 O B:ASN206 4.9 25.4 1.0 CG B:ASN206 5.0 32.3 1.0 OD1 B:ASN335 5.0 21.4 1.0

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.