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Chlorine in PDB 3mor: Crystal Structure of Cathepsin B From Trypanosoma Brucei

Protein crystallography data

The structure of Crystal Structure of Cathepsin B From Trypanosoma Brucei, PDB code: 3mor was solved by K.Cupelli, T.Stehle, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.00 / 2.55
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 53.910, 75.490, 75.600, 90.00, 104.80, 90.00
R / Rfree (%) 20.2 / 24.3

Other elements in 3mor:

The structure of Crystal Structure of Cathepsin B From Trypanosoma Brucei also contains other interesting chemical elements:

Sodium (Na) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Cathepsin B From Trypanosoma Brucei (pdb code 3mor). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Cathepsin B From Trypanosoma Brucei, PDB code: 3mor:

Chlorine binding site 1 out of 1 in 3mor

Go back to Chlorine Binding Sites List in 3mor
Chlorine binding site 1 out of 1 in the Crystal Structure of Cathepsin B From Trypanosoma Brucei


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Cathepsin B From Trypanosoma Brucei within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl342

b:38.4
occ:1.00
NH2 B:ARG317 3.7 16.3 1.0
NH1 B:ARG317 4.0 10.2 1.0
CE1 B:HIS272 4.3 21.7 1.0
CZ B:ARG317 4.3 15.8 1.0
ND1 B:HIS272 4.7 20.4 1.0
NE2 B:HIS272 5.0 19.8 1.0

Reference:

R.Koopmann, K.Cupelli, L.Redecke, K.Nass, D.P.Deponte, T.A.White, F.Stellato, D.Rehders, M.Liang, J.Andreasson, A.Aquila, S.Bajt, M.Barthelmess, A.Barty, M.J.Bogan, C.Bostedt, S.Boutet, J.D.Bozek, C.Caleman, N.Coppola, J.Davidsson, R.B.Doak, T.Ekeberg, S.W.Epp, B.Erk, H.Fleckenstein, L.Foucar, H.Graafsma, L.Gumprecht, J.Hajdu, C.Y.Hampton, A.Hartmann, R.Hartmann, G.Hauser, H.Hirsemann, P.Holl, M.S.Hunter, S.Kassemeyer, R.A.Kirian, L.Lomb, F.R.Maia, N.Kimmel, A.V.Martin, M.Messerschmidt, C.Reich, D.Rolles, B.Rudek, A.Rudenko, I.Schlichting, J.Schulz, M.M.Seibert, R.L.Shoeman, R.G.Sierra, H.Soltau, S.Stern, L.Struder, N.Timneanu, J.Ullrich, X.Wang, G.Weidenspointner, U.Weierstall, G.J.Williams, C.B.Wunderer, P.Fromme, J.C.Spence, T.Stehle, H.N.Chapman, C.Betzel, M.Duszenko. In Vivo Protein Crystallization Opens New Routes in Structural Biology. Nat.Methods V. 9 259 2012.
ISSN: ISSN 1548-7091
PubMed: 22286384
DOI: 10.1038/NMETH.1859
Page generated: Fri Jul 11 07:55:52 2025

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