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Chlorine in PDB 3n9a: Mite-Y Lysozyme: Vegemite

Enzymatic activity of Mite-Y Lysozyme: Vegemite

All present enzymatic activity of Mite-Y Lysozyme: Vegemite:
3.2.1.17;

Protein crystallography data

The structure of Mite-Y Lysozyme: Vegemite, PDB code: 3n9a was solved by J.Newman, T.S.Peat, D.Lucent, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 31.39 / 1.40
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 79.289, 79.289, 37.889, 90.00, 90.00, 90.00
R / Rfree (%) 16.2 / 18.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Mite-Y Lysozyme: Vegemite (pdb code 3n9a). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Mite-Y Lysozyme: Vegemite, PDB code: 3n9a:

Chlorine binding site 1 out of 1 in 3n9a

Go back to Chlorine Binding Sites List in 3n9a
Chlorine binding site 1 out of 1 in the Mite-Y Lysozyme: Vegemite


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Mite-Y Lysozyme: Vegemite within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl130

b:21.3
occ:0.90
ND2 A:ASN113 3.2 14.7 1.0
CB A:ASN113 3.5 13.7 1.0
CG A:ASN113 3.9 15.4 1.0
CG1 A:VAL109 3.9 19.2 0.5
O A:VAL109 4.1 14.2 0.5
O A:VAL109 4.1 13.8 0.5
CA A:ALA110 4.1 12.7 1.0
CG2 A:VAL109 4.1 19.7 0.5
C A:VAL109 4.3 13.2 0.5
C A:VAL109 4.3 13.8 0.5
N A:ALA110 4.4 13.4 1.0
CD A:ARG114 4.4 17.6 1.0
CG A:ARG114 4.5 17.4 1.0
CB A:ALA110 4.7 17.5 1.0
CG1 A:VAL109 4.7 16.2 0.5
CA A:ASN113 4.9 13.8 1.0
CB A:VAL109 4.9 15.3 0.5
CB A:VAL109 5.0 15.6 0.5

Reference:

J.Newman, T.S.Peat, D.Lucent. Mite-Y Lysozyme Crystals and Structures To Be Published.
Page generated: Fri Jul 11 08:10:55 2025

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