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Chlorine in PDB 3nkl: Crystal Structure of Udp-D-Quinovosamine 4-Dehydrogenase From Vibrio Fischeri

Protein crystallography data

The structure of Crystal Structure of Udp-D-Quinovosamine 4-Dehydrogenase From Vibrio Fischeri, PDB code: 3nkl was solved by Y.Kim, J.Mack, K.Buck, A.Joachimiak, Midwest Center For Structuralgenomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.22 / 1.90
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 108.262, 45.379, 69.813, 90.00, 91.54, 90.00
R / Rfree (%) 16.7 / 19.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Udp-D-Quinovosamine 4-Dehydrogenase From Vibrio Fischeri (pdb code 3nkl). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Udp-D-Quinovosamine 4-Dehydrogenase From Vibrio Fischeri, PDB code: 3nkl:

Chlorine binding site 1 out of 1 in 3nkl

Go back to Chlorine Binding Sites List in 3nkl
Chlorine binding site 1 out of 1 in the Crystal Structure of Udp-D-Quinovosamine 4-Dehydrogenase From Vibrio Fischeri


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Udp-D-Quinovosamine 4-Dehydrogenase From Vibrio Fischeri within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl141

b:22.2
occ:1.00
O A:HOH163 3.0 17.6 1.0
OG B:SER72 3.0 20.9 1.0
N B:SER72 3.2 12.8 1.0
C1 A:GOL139 3.3 53.6 1.0
CD B:PRO71 3.3 14.5 1.0
N B:PRO71 3.5 16.7 1.0
CB B:SER72 3.6 17.3 1.0
CG B:PRO71 3.7 16.1 1.0
CA B:VAL70 3.7 14.5 1.0
C B:VAL70 3.7 13.4 1.0
CB A:SER11 3.9 19.0 1.0
N A:SER11 3.9 20.4 1.0
CA B:SER72 4.0 15.5 1.0
C2 A:GOL139 4.0 60.2 1.0
O B:ALA69 4.1 17.4 1.0
O B:HOH152 4.1 20.0 1.0
C B:PRO71 4.2 17.7 1.0
O3 A:SO4141 4.2 19.9 1.0
C3 A:GOL139 4.2 63.9 1.0
CA A:SER11 4.3 16.5 1.0
CA B:PRO71 4.4 15.9 1.0
O B:VAL70 4.5 14.0 1.0
O1 A:GOL139 4.5 30.1 1.0
CB B:VAL70 4.6 19.6 1.0
N B:VAL70 4.6 16.2 1.0
CB B:PRO71 4.6 16.1 1.0
C B:ALA69 4.7 17.7 1.0
CB B:ALA12 4.7 17.6 1.0
C A:GLY10 4.7 18.4 1.0
C B:SER72 4.8 13.4 1.0
O3 A:GOL139 4.8 57.4 1.0
CG1 B:VAL70 4.9 21.9 1.0
OG A:SER11 4.9 19.9 1.0
N B:ALA73 5.0 15.2 1.0
CA A:GLY10 5.0 16.1 1.0

Reference:

Y.Kim, J.Mack, K.Buck, A.Joachimiak. Crystal Structure of Udp-D-Quinovosamine 4-Dehydrogenase From Vibrio Fischeri To Be Published 2010.
Page generated: Fri Jul 11 08:22:27 2025

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