Atomistry » Chlorine » PDB 3o6o-3oht » 3oca
Atomistry »
  Chlorine »
    PDB 3o6o-3oht »
      3oca »

Chlorine in PDB 3oca: Crystal Structure of Peptide Deformylase From Ehrlichia Chaffeensis

Enzymatic activity of Crystal Structure of Peptide Deformylase From Ehrlichia Chaffeensis

All present enzymatic activity of Crystal Structure of Peptide Deformylase From Ehrlichia Chaffeensis:
3.5.1.88;

Protein crystallography data

The structure of Crystal Structure of Peptide Deformylase From Ehrlichia Chaffeensis, PDB code: 3oca was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.67 / 2.40
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 84.260, 64.430, 80.910, 90.00, 90.00, 90.00
R / Rfree (%) 19.2 / 24.6

Other elements in 3oca:

The structure of Crystal Structure of Peptide Deformylase From Ehrlichia Chaffeensis also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Peptide Deformylase From Ehrlichia Chaffeensis (pdb code 3oca). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Peptide Deformylase From Ehrlichia Chaffeensis, PDB code: 3oca:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3oca

Go back to Chlorine Binding Sites List in 3oca
Chlorine binding site 1 out of 2 in the Crystal Structure of Peptide Deformylase From Ehrlichia Chaffeensis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Peptide Deformylase From Ehrlichia Chaffeensis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:52.1
occ:1.00
OE2 A:GLU138 3.0 46.0 1.0
O A:HOH241 3.7 38.1 1.0
O A:ASN94 3.8 22.8 1.0
CA A:TYR131 4.1 23.3 1.0
CD A:GLU138 4.2 42.1 1.0
N A:TYR131 4.3 22.6 1.0
C A:TYR131 4.3 24.7 1.0
CD2 A:LEU132 4.3 25.1 1.0
O A:GLN130 4.4 21.5 1.0
CG A:LEU132 4.4 26.1 1.0
C A:GLN130 4.5 22.3 1.0
CB A:ASN94 4.5 22.6 1.0
N A:LEU132 4.5 24.8 1.0
OE1 A:GLU138 4.8 44.4 1.0
O A:TYR131 4.8 25.8 1.0
C A:ASN94 4.8 22.4 1.0
CB A:GLN130 4.8 23.9 1.0
CB A:LYS96 4.9 24.3 1.0

Chlorine binding site 2 out of 2 in 3oca

Go back to Chlorine Binding Sites List in 3oca
Chlorine binding site 2 out of 2 in the Crystal Structure of Peptide Deformylase From Ehrlichia Chaffeensis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Peptide Deformylase From Ehrlichia Chaffeensis within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl301

b:58.1
occ:1.00
OE2 B:GLU138 3.7 45.2 1.0
OE1 B:GLU138 3.7 44.3 1.0
O B:ASN94 3.8 21.6 1.0
CD B:GLU138 4.0 42.2 1.0
CA B:TYR131 4.1 21.2 1.0
N B:TYR131 4.2 21.5 1.0
O B:GLN130 4.2 21.9 1.0
C B:GLN130 4.3 21.9 1.0
C B:TYR131 4.3 22.2 1.0
CB B:GLN130 4.5 24.4 1.0
N B:LEU132 4.6 22.0 1.0
O B:TYR131 4.7 22.3 1.0
CB B:ASN94 4.8 21.4 1.0
CG B:LEU132 4.8 22.2 1.0
CD2 B:LEU132 4.8 21.0 1.0
CB B:LYS96 4.8 24.0 1.0
OE1 B:GLN130 4.9 39.6 1.0
C B:ASN94 4.9 20.7 1.0

Reference:

Seattle Structural Genomics Center For Infectious Disease(Ssgcid), J.Abendroth, B.Sankaran, T.E.Edwards, B.Staker. Crystal Structure of Peptide Deformylase From Ehrlichia Chaffeensis To Be Published.
Page generated: Fri Jul 11 08:38:36 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy