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Chlorine in PDB 3pvq: Crystal Structure of A Putative Dipeptidyl-Peptidase VI (BT_1314) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.10 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Putative Dipeptidyl-Peptidase VI (BT_1314) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.10 A Resolution, PDB code: 3pvq was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.16 / 2.10
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 64.919, 50.295, 107.562, 90.00, 93.50, 90.00
R / Rfree (%) 16.5 / 19.8

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Putative Dipeptidyl-Peptidase VI (BT_1314) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.10 A Resolution (pdb code 3pvq). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of A Putative Dipeptidyl-Peptidase VI (BT_1314) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.10 A Resolution, PDB code: 3pvq:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3pvq

Go back to Chlorine Binding Sites List in 3pvq
Chlorine binding site 1 out of 2 in the Crystal Structure of A Putative Dipeptidyl-Peptidase VI (BT_1314) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.10 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Putative Dipeptidyl-Peptidase VI (BT_1314) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.10 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl330

b:25.4
occ:1.00
O A:HOH423 3.0 24.5 1.0
NH2 A:ARG44 3.2 26.8 1.0
ND2 A:ASN42 3.2 18.3 1.0
N B:TRP193 3.3 19.2 1.0
NE A:ARG44 3.7 27.1 1.0
CD1 A:PHE49 3.7 31.9 1.0
CA B:LEU192 3.8 14.3 1.0
CB A:ASN42 3.8 19.9 1.0
CE1 A:PHE49 3.9 33.5 1.0
CD1 B:TYR191 3.9 22.0 1.0
CZ A:ARG44 3.9 36.9 1.0
CG A:ASN42 3.9 26.7 1.0
CE1 B:TYR191 4.0 22.8 1.0
C B:LEU192 4.0 19.0 1.0
CB B:TRP193 4.1 20.5 1.0
O B:TYR191 4.1 18.8 1.0
CA B:TRP193 4.3 19.6 1.0
O B:HOH490 4.4 31.1 1.0
O A:HOH522 4.4 32.1 1.0
N B:LEU192 4.5 15.6 1.0
CD1 B:LEU192 4.5 18.9 1.0
C B:TYR191 4.5 20.2 1.0
O A:HOH372 4.6 20.3 1.0
O B:HOH431 4.7 20.6 1.0
CB B:LEU192 4.9 13.1 1.0
O A:ASN42 4.9 21.7 1.0
CD A:ARG44 5.0 29.4 1.0
CG A:PHE49 5.0 30.3 1.0

Chlorine binding site 2 out of 2 in 3pvq

Go back to Chlorine Binding Sites List in 3pvq
Chlorine binding site 2 out of 2 in the Crystal Structure of A Putative Dipeptidyl-Peptidase VI (BT_1314) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.10 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Putative Dipeptidyl-Peptidase VI (BT_1314) From Bacteroides Thetaiotaomicron Vpi-5482 at 2.10 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl329

b:24.7
occ:1.00
O B:HOH532 2.9 26.5 1.0
NH2 B:ARG44 3.1 26.8 1.0
ND2 B:ASN42 3.3 19.6 1.0
N A:TRP193 3.4 20.1 1.0
NE B:ARG44 3.6 25.1 1.0
CB B:ASN42 3.8 13.6 1.0
CZ B:ARG44 3.8 36.7 1.0
CD1 B:PHE49 3.8 34.8 1.0
CA A:LEU192 3.9 17.9 1.0
CG B:ASN42 3.9 26.1 1.0
CD1 A:TYR191 4.0 20.7 1.0
CE1 B:PHE49 4.0 34.7 1.0
CB A:TRP193 4.1 22.1 1.0
CE1 A:TYR191 4.1 23.4 1.0
C A:LEU192 4.1 21.6 1.0
O A:TYR191 4.1 21.3 1.0
CA A:TRP193 4.3 21.4 1.0
O A:HOH406 4.4 24.3 1.0
O B:HOH463 4.4 25.0 1.0
CD1 A:LEU192 4.5 21.5 1.0
N A:LEU192 4.5 18.2 1.0
O B:HOH345 4.6 17.2 1.0
O A:HOH363 4.6 16.2 1.0
C A:TYR191 4.6 20.7 1.0
O B:ASN42 4.8 23.1 1.0
CD B:ARG44 4.9 28.4 1.0
CB A:LEU192 4.9 17.3 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Fri Jul 11 09:13:55 2025

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