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Chlorine in PDB 3qoc: Crystal Structure of N-Terminal Domain (Creatinase/Prolidase Like Domain) of Putative Metallopeptidase From Corynebacterium Diphtheriae

Protein crystallography data

The structure of Crystal Structure of N-Terminal Domain (Creatinase/Prolidase Like Domain) of Putative Metallopeptidase From Corynebacterium Diphtheriae, PDB code: 3qoc was solved by B.Nocek, A.Stein, N.Marshall, R.Putagunta, B.Feldmann, A.Joachimiak, Midwest Center For Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 2.15
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 79.013, 82.588, 104.102, 90.00, 90.00, 90.00
R / Rfree (%) 20.7 / 25.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of N-Terminal Domain (Creatinase/Prolidase Like Domain) of Putative Metallopeptidase From Corynebacterium Diphtheriae (pdb code 3qoc). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of N-Terminal Domain (Creatinase/Prolidase Like Domain) of Putative Metallopeptidase From Corynebacterium Diphtheriae, PDB code: 3qoc:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3qoc

Go back to Chlorine Binding Sites List in 3qoc
Chlorine binding site 1 out of 2 in the Crystal Structure of N-Terminal Domain (Creatinase/Prolidase Like Domain) of Putative Metallopeptidase From Corynebacterium Diphtheriae


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of N-Terminal Domain (Creatinase/Prolidase Like Domain) of Putative Metallopeptidase From Corynebacterium Diphtheriae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl501

b:31.2
occ:1.00
NH1 A:ARG9 3.2 35.5 1.0
N A:ARG9 3.4 25.4 1.0
CG A:ARG9 3.8 27.2 1.0
CA A:THR8 3.9 25.5 1.0
CB A:ARG9 4.1 26.3 1.0
C A:THR8 4.1 25.4 1.0
CD A:ARG9 4.2 27.9 1.0
CB A:THR8 4.3 23.8 1.0
CZ A:ARG9 4.3 31.1 1.0
CA A:ARG9 4.4 25.4 1.0
NE A:ARG9 4.7 29.7 1.0
CG2 A:THR8 4.7 27.1 1.0
O A:ASP7 4.9 29.4 1.0

Chlorine binding site 2 out of 2 in 3qoc

Go back to Chlorine Binding Sites List in 3qoc
Chlorine binding site 2 out of 2 in the Crystal Structure of N-Terminal Domain (Creatinase/Prolidase Like Domain) of Putative Metallopeptidase From Corynebacterium Diphtheriae


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of N-Terminal Domain (Creatinase/Prolidase Like Domain) of Putative Metallopeptidase From Corynebacterium Diphtheriae within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl501

b:45.5
occ:1.00
NH2 C:ARG38 3.0 26.8 1.0
CD C:ARG38 3.9 28.1 1.0
CZ C:ARG38 4.1 25.9 1.0
NE C:ARG38 4.4 25.3 1.0
CG2 C:THR35 4.6 30.1 1.0
CG C:ARG38 5.0 21.2 1.0

Reference:

B.Nocek, A.Stein, N.Marshall, R.Putagunta, B.Feldmann, A.Joachimiak. Crystal Structure of N-Terminal Domain (Creatinase/Prolidase Like Domain) of Putative Metallopeptidase From Corynebacterium Diphtheriae To Be Published.
Page generated: Fri Jul 11 09:27:57 2025

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