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Chlorine in PDB 3r9l: Crystal Structure of Nucleoside Diphosphate Kinase From Giardia Lamblia Featuring A Disordered Dinucleotide Binding Site

Enzymatic activity of Crystal Structure of Nucleoside Diphosphate Kinase From Giardia Lamblia Featuring A Disordered Dinucleotide Binding Site

All present enzymatic activity of Crystal Structure of Nucleoside Diphosphate Kinase From Giardia Lamblia Featuring A Disordered Dinucleotide Binding Site:
2.7.4.6;

Protein crystallography data

The structure of Crystal Structure of Nucleoside Diphosphate Kinase From Giardia Lamblia Featuring A Disordered Dinucleotide Binding Site, PDB code: 3r9l was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 39.40 / 2.65
Space group P 63 2 2
Cell size a, b, c (Å), α, β, γ (°) 116.960, 116.960, 62.690, 90.00, 90.00, 120.00
R / Rfree (%) 23.4 / 26.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Nucleoside Diphosphate Kinase From Giardia Lamblia Featuring A Disordered Dinucleotide Binding Site (pdb code 3r9l). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Nucleoside Diphosphate Kinase From Giardia Lamblia Featuring A Disordered Dinucleotide Binding Site, PDB code: 3r9l:

Chlorine binding site 1 out of 1 in 3r9l

Go back to Chlorine Binding Sites List in 3r9l
Chlorine binding site 1 out of 1 in the Crystal Structure of Nucleoside Diphosphate Kinase From Giardia Lamblia Featuring A Disordered Dinucleotide Binding Site


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Nucleoside Diphosphate Kinase From Giardia Lamblia Featuring A Disordered Dinucleotide Binding Site within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl152

b:84.4
occ:1.00
ND1 A:HIS117 3.3 74.0 1.0
NZ A:LYS11 3.5 80.3 1.0
CE1 A:HIS117 4.2 74.8 1.0
CG A:HIS117 4.3 72.8 1.0
ND2 A:ASN114 4.4 92.7 1.0
CB A:HIS117 4.4 72.3 1.0
NH2 A:ARG104 4.6 55.3 1.0
CE A:LYS11 4.6 80.4 1.0
CA A:HIS117 4.7 69.4 1.0
O A:ILE116 4.8 70.5 1.0

Reference:

T.E.Edwards, A.S.Gardberg, B.Sankaran, Seattle Structural Genomics Center For Infectious Disease(Ssgcid). Crystal Structure of Nucleoside Diphosphate Kinase From Giardia Lamblia Featuring A Disordered Dinucleotide Binding Site To Be Published.
Page generated: Fri Jul 11 09:45:31 2025

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