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Chlorine in PDB 3rtl: Staphylococcus Aureus Heme-Bound Isdb-N2

Protein crystallography data

The structure of Staphylococcus Aureus Heme-Bound Isdb-N2, PDB code: 3rtl was solved by C.F.M.Gaudin, J.C.Grigg, A.L.Arrieta, M.E.P.Murphy, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 67.42 / 1.45
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 57.527, 82.608, 116.888, 90.00, 90.00, 90.00
R / Rfree (%) 17.8 / 21.7

Other elements in 3rtl:

The structure of Staphylococcus Aureus Heme-Bound Isdb-N2 also contains other interesting chemical elements:

Magnesium (Mg) 5 atoms
Iron (Fe) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Staphylococcus Aureus Heme-Bound Isdb-N2 (pdb code 3rtl). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Staphylococcus Aureus Heme-Bound Isdb-N2, PDB code: 3rtl:

Chlorine binding site 1 out of 1 in 3rtl

Go back to Chlorine Binding Sites List in 3rtl
Chlorine binding site 1 out of 1 in the Staphylococcus Aureus Heme-Bound Isdb-N2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Staphylococcus Aureus Heme-Bound Isdb-N2 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl1

b:17.1
occ:1.00
O D:HOH107 3.2 21.4 1.0
NZ D:LYS407 3.2 21.1 1.0
NH1 D:ARG414 3.5 15.5 1.0
CE D:LYS407 3.6 20.9 1.0
CB D:THR404 3.7 15.0 1.0
CG2 D:THR404 3.8 15.7 1.0
OG1 D:THR404 3.9 15.4 1.0
CD D:LYS407 4.1 22.0 1.0
CZ D:ARG414 4.7 14.5 1.0
O D:HOH49 5.0 18.2 1.0

Reference:

C.F.Gaudin, J.C.Grigg, A.L.Arrieta, M.E.Murphy. Unique Heme-Iron Coordination By the Hemoglobin Receptor Isdb of Staphylococcus Aureus. Biochemistry V. 50 5443 2011.
ISSN: ISSN 0006-2960
PubMed: 21574663
DOI: 10.1021/BI200369P
Page generated: Fri Jul 11 10:00:15 2025

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