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Chlorine in PDB 3v4m: Crystal Structure of A Rna Binding Domain of A U2 Small Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2AF) From Mus Musculus at 1.80 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Rna Binding Domain of A U2 Small Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2AF) From Mus Musculus at 1.80 A Resolution, PDB code: 3v4m was solved by Joint Center For Structural Genomics (Jcsg), Partnership For T-Cellbiology (Tcell), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.19 / 1.80
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 60.192, 60.192, 239.686, 90.00, 90.00, 120.00
R / Rfree (%) 17.7 / 20.7

Other elements in 3v4m:

The structure of Crystal Structure of A Rna Binding Domain of A U2 Small Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2AF) From Mus Musculus at 1.80 A Resolution also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Rna Binding Domain of A U2 Small Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2AF) From Mus Musculus at 1.80 A Resolution (pdb code 3v4m). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of A Rna Binding Domain of A U2 Small Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2AF) From Mus Musculus at 1.80 A Resolution, PDB code: 3v4m:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3v4m

Go back to Chlorine Binding Sites List in 3v4m
Chlorine binding site 1 out of 2 in the Crystal Structure of A Rna Binding Domain of A U2 Small Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2AF) From Mus Musculus at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Rna Binding Domain of A U2 Small Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2AF) From Mus Musculus at 1.80 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl478

b:32.0
occ:1.00
O A:HOH626 3.0 36.0 1.0
N A:VAL458 3.2 18.9 1.0
ND2 A:ASN382 3.3 21.8 1.0
O B:HOH513 3.5 26.6 1.0
CA A:ARG457 3.7 22.0 0.5
CA A:ARG457 3.7 22.0 0.5
CG B:PRO386 3.9 24.7 1.0
CD B:PRO386 3.9 26.1 1.0
C A:ARG457 4.0 20.6 1.0
CB A:VAL458 4.0 18.5 1.0
CG2 A:VAL458 4.0 19.6 1.0
CB A:ARG457 4.1 22.6 0.5
CA A:VAL458 4.1 17.5 1.0
CB A:ARG457 4.2 22.4 0.5
NH2 A:ARG457 4.2 27.6 0.5
CZ A:ARG457 4.3 28.6 0.5
CB B:PRO386 4.4 25.5 1.0
CG A:ASN382 4.4 22.8 1.0
NE A:ARG457 4.5 27.4 0.5
O A:ASN456 4.5 23.9 1.0
CD2 B:LEU385 4.5 37.3 1.0
CG A:ARG457 4.5 25.2 0.5
CG A:ARG457 4.5 25.4 0.5
O A:VAL458 4.7 15.3 1.0
NH1 A:ARG457 4.8 31.1 0.5
OD1 A:ASN382 4.8 23.0 1.0
N A:ARG457 4.9 22.6 1.0
C A:VAL458 4.9 16.0 1.0

Chlorine binding site 2 out of 2 in 3v4m

Go back to Chlorine Binding Sites List in 3v4m
Chlorine binding site 2 out of 2 in the Crystal Structure of A Rna Binding Domain of A U2 Small Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2AF) From Mus Musculus at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Rna Binding Domain of A U2 Small Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2AF) From Mus Musculus at 1.80 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl477

b:38.1
occ:1.00
N B:ASP422 2.9 16.3 1.0
CG B:ASP422 3.4 25.0 1.0
CB B:ASP422 3.6 20.6 1.0
CA B:VAL421 3.7 15.3 1.0
OD1 B:ASP422 3.7 28.1 1.0
C B:VAL421 3.8 15.7 1.0
OD2 B:ASP422 3.8 34.1 1.0
CA B:ASP422 3.8 17.9 1.0
O B:PRO420 4.3 15.8 1.0
CD2 B:LEU390 4.5 24.3 1.0
CG1 B:VAL421 4.6 15.2 1.0
N B:VAL421 4.6 15.0 1.0
O B:HOH591 4.6 40.1 1.0
CB B:VAL421 4.7 14.6 1.0
C B:PRO420 4.8 15.9 1.0
O B:ASP422 4.8 17.2 1.0
C B:ASP422 4.9 17.6 1.0
O B:VAL421 5.0 15.4 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Partnership For T-Cell Biology (Tcell). Crystal Structure of A Rna Binding Domain of A U2 Small Nuclear Ribonucleoprotein Auxiliary Factor 2 (U2AF) From Mus Musculus at 1.80 A Resolution To Be Published.
Page generated: Fri Jul 11 11:34:53 2025

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