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Chlorine in PDB 3vav: Crystal Structure of 3-Methyl-2-Oxobutanoate Hydroxymethyltransferase From Burkholderia Thailandensis

Enzymatic activity of Crystal Structure of 3-Methyl-2-Oxobutanoate Hydroxymethyltransferase From Burkholderia Thailandensis

All present enzymatic activity of Crystal Structure of 3-Methyl-2-Oxobutanoate Hydroxymethyltransferase From Burkholderia Thailandensis:
2.1.2.11;

Protein crystallography data

The structure of Crystal Structure of 3-Methyl-2-Oxobutanoate Hydroxymethyltransferase From Burkholderia Thailandensis, PDB code: 3vav was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.80
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 81.710, 174.750, 104.580, 90.00, 108.71, 90.00
R / Rfree (%) 15.4 / 18

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of 3-Methyl-2-Oxobutanoate Hydroxymethyltransferase From Burkholderia Thailandensis (pdb code 3vav). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of 3-Methyl-2-Oxobutanoate Hydroxymethyltransferase From Burkholderia Thailandensis, PDB code: 3vav:

Chlorine binding site 1 out of 1 in 3vav

Go back to Chlorine Binding Sites List in 3vav
Chlorine binding site 1 out of 1 in the Crystal Structure of 3-Methyl-2-Oxobutanoate Hydroxymethyltransferase From Burkholderia Thailandensis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of 3-Methyl-2-Oxobutanoate Hydroxymethyltransferase From Burkholderia Thailandensis within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Cl273

b:46.1
occ:1.00
O I:HOH1794 2.8 23.3 1.0
O D:HOH648 3.0 23.7 1.0
O I:HOH736 3.7 31.7 1.0
CG I:TYR75 3.8 9.4 1.0
CG D:TYR75 3.9 9.4 1.0
CD1 I:TYR75 3.9 9.9 1.0
O D:HOH2229 3.9 29.4 1.0
CD1 D:TYR75 3.9 9.8 1.0
CB I:TYR75 4.0 9.0 1.0
CB D:TYR75 4.1 9.1 1.0
CD2 I:TYR75 4.2 9.4 1.0
CD2 D:TYR75 4.2 9.3 1.0
CE1 D:TYR75 4.4 10.2 1.0
CE1 I:TYR75 4.4 10.1 1.0
O I:HOH1463 4.6 37.9 1.0
CE2 D:TYR75 4.7 9.6 1.0
CE2 I:TYR75 4.7 9.6 1.0
CZ D:TYR75 4.8 9.8 1.0
CZ I:TYR75 4.8 9.9 1.0
O I:HOH2230 4.8 29.9 1.0
OD1 I:ASP72 4.9 9.8 1.0
O I:HOH303 5.0 16.0 1.0

Reference:

L.Baugh, L.A.Gallagher, R.Patrapuvich, M.C.Clifton, A.S.Gardberg, T.E.Edwards, B.Armour, D.W.Begley, S.H.Dieterich, D.M.Dranow, J.Abendroth, J.W.Fairman, D.Fox, B.L.Staker, I.Phan, A.Gillespie, R.Choi, S.Nakazawa-Hewitt, M.T.Nguyen, A.Napuli, L.Barrett, G.W.Buchko, R.Stacy, P.J.Myler, L.J.Stewart, C.Manoil, W.C.Van Voorhis. Combining Functional and Structural Genomics to Sample the Essential Burkholderia Structome. Plos One V. 8 53851 2013.
ISSN: ESSN 1932-6203
PubMed: 23382856
DOI: 10.1371/JOURNAL.PONE.0053851
Page generated: Fri Jul 11 11:36:55 2025

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