Atomistry » Chlorine » PDB 3v6e-3vfb » 3vcn
Atomistry »
  Chlorine »
    PDB 3v6e-3vfb »
      3vcn »

Chlorine in PDB 3vcn: Crystal Structure of Mannonate Dehydratase (Target Efi-502209) From Caulobacter Crescentus CB15

Protein crystallography data

The structure of Crystal Structure of Mannonate Dehydratase (Target Efi-502209) From Caulobacter Crescentus CB15, PDB code: 3vcn was solved by Y.Patskovsky, R.Toro, R.Bhosle, B.Hillerich, R.D.Seidel, E.Washington, A.Scott Glenn, S.Chowdhury, B.Evans, J.Hammonds, W.D.Zencheck, H.J.Imker, J.A.Gerlt, S.C.Almo, Enzyme Function Initiative (Efi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.45
Space group I 4
Cell size a, b, c (Å), α, β, γ (°) 116.302, 116.302, 118.078, 90.00, 90.00, 90.00
R / Rfree (%) 13 / 18.8

Other elements in 3vcn:

The structure of Crystal Structure of Mannonate Dehydratase (Target Efi-502209) From Caulobacter Crescentus CB15 also contains other interesting chemical elements:

Magnesium (Mg) 4 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Mannonate Dehydratase (Target Efi-502209) From Caulobacter Crescentus CB15 (pdb code 3vcn). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Mannonate Dehydratase (Target Efi-502209) From Caulobacter Crescentus CB15, PDB code: 3vcn:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3vcn

Go back to Chlorine Binding Sites List in 3vcn
Chlorine binding site 1 out of 2 in the Crystal Structure of Mannonate Dehydratase (Target Efi-502209) From Caulobacter Crescentus CB15


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Mannonate Dehydratase (Target Efi-502209) From Caulobacter Crescentus CB15 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl504

b:33.0
occ:1.00
CL C:CL504 2.6 33.0 1.0
O A:GLY79 3.2 27.8 1.0
N A:ALA83 3.4 17.4 1.0
CA A:GLY80 3.5 19.0 1.0
C A:GLY80 3.5 18.0 1.0
N A:VAL82 3.5 19.4 1.0
CD C:PRO81 3.7 19.7 1.0
CB A:VAL82 3.7 16.8 1.0
N C:VAL82 3.7 17.8 1.0
CG2 C:VAL82 3.8 17.5 1.0
O A:GLY80 3.8 18.4 1.0
O A:HOH994 3.9 49.2 1.0
N C:PRO81 3.9 18.5 1.0
N A:PRO81 3.9 17.8 1.0
CA A:VAL82 3.9 15.7 1.0
CB A:ALA83 4.0 17.6 1.0
CB C:VAL82 4.0 16.3 1.0
C A:GLY79 4.1 25.8 1.0
C A:VAL82 4.1 18.0 1.0
N A:GLY80 4.3 22.4 1.0
CA A:ALA83 4.3 17.6 1.0
C C:GLY80 4.3 18.4 1.0
CA C:GLY80 4.3 18.8 1.0
CG2 A:VAL82 4.4 18.2 1.0
C A:PRO81 4.5 15.9 1.0
CA C:VAL82 4.5 16.0 1.0
CD A:PRO81 4.6 17.9 1.0
CG C:PRO81 4.6 23.2 1.0
CA C:PRO81 4.7 17.8 1.0
CB C:PRO81 4.7 19.5 1.0
C C:PRO81 4.7 16.8 1.0
CG1 A:VAL82 4.8 19.5 1.0
CA A:PRO81 4.8 17.6 1.0

Chlorine binding site 2 out of 2 in 3vcn

Go back to Chlorine Binding Sites List in 3vcn
Chlorine binding site 2 out of 2 in the Crystal Structure of Mannonate Dehydratase (Target Efi-502209) From Caulobacter Crescentus CB15


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Mannonate Dehydratase (Target Efi-502209) From Caulobacter Crescentus CB15 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl504

b:33.0
occ:1.00
CL A:CL504 2.6 33.0 1.0
O C:GLY79 3.3 29.7 1.0
N C:ALA83 3.3 16.2 1.0
N C:VAL82 3.5 17.8 1.0
CA C:GLY80 3.5 18.8 1.0
O C:HOH938 3.5 43.6 1.0
C C:GLY80 3.5 18.4 1.0
CB C:VAL82 3.6 16.3 1.0
CG2 A:VAL82 3.7 18.2 1.0
N A:VAL82 3.7 19.4 1.0
CD A:PRO81 3.8 17.9 1.0
O C:GLY80 3.8 18.2 1.0
CA C:VAL82 3.9 16.0 1.0
N C:PRO81 3.9 18.5 1.0
N A:PRO81 3.9 17.8 1.0
CB A:VAL82 4.0 16.8 1.0
CB C:ALA83 4.0 20.3 1.0
C C:VAL82 4.1 18.2 1.0
C C:GLY79 4.2 27.0 1.0
N C:GLY80 4.3 18.5 1.0
CA C:ALA83 4.3 16.4 1.0
C A:GLY80 4.3 18.0 1.0
CG2 C:VAL82 4.4 17.5 1.0
CA A:GLY80 4.4 19.0 1.0
C C:PRO81 4.4 16.8 1.0
CA A:VAL82 4.5 15.7 1.0
CD C:PRO81 4.5 19.7 1.0
CA A:PRO81 4.7 17.6 1.0
C A:PRO81 4.7 15.9 1.0
CG A:PRO81 4.7 24.1 1.0
CG1 C:VAL82 4.7 17.9 1.0
CA C:PRO81 4.8 17.8 1.0
CB A:PRO81 4.8 19.0 1.0

Reference:

Y.Patskovsky, R.Toro, R.Bhosle, B.Hillerich, R.D.Seidel, E.Washington, A.Scott Glenn, S.Chowdhury, B.Evans, J.Hammonds, W.D.Zencheck, H.J.Imker, J.A.Gerlt, S.C.Almo. Crystal Structure of Mannonate Dehydratase From Caulobacter Crescentus CB15 To Be Published.
Page generated: Fri Jul 11 11:38:27 2025

Last articles

Fe in 2YXO
Fe in 2YRS
Fe in 2YXC
Fe in 2YNM
Fe in 2YVJ
Fe in 2YP1
Fe in 2YU2
Fe in 2YU1
Fe in 2YQB
Fe in 2YOO
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy