Chlorine in PDB 3vin: Crystal Structure of Beta-Glucosidase From Termite Neotermes Koshunensis in Complex with A New Glucopyranosidic Product

Enzymatic activity of Crystal Structure of Beta-Glucosidase From Termite Neotermes Koshunensis in Complex with A New Glucopyranosidic Product

All present enzymatic activity of Crystal Structure of Beta-Glucosidase From Termite Neotermes Koshunensis in Complex with A New Glucopyranosidic Product:
3.2.1.21;

Protein crystallography data

The structure of Crystal Structure of Beta-Glucosidase From Termite Neotermes Koshunensis in Complex with A New Glucopyranosidic Product, PDB code: 3vin was solved by W.Y.Jeng, C.I.Liu, A.H.J.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	22.50 / 1.13
*Space group*	C 1 2 1
*Cell size a, b, c (Å), α, β, γ (°)*	93.152, 68.573, 75.638, 90.00, 95.61, 90.00
*R / R_free (%)*	13.5 / 15.6

Other elements in 3vin:

The structure of Crystal Structure of Beta-Glucosidase From Termite Neotermes Koshunensis in Complex with A New Glucopyranosidic Product also contains other interesting chemical elements:

Sodium

(Na)

1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Beta-Glucosidase From Termite Neotermes Koshunensis in Complex with A New Glucopyranosidic Product (pdb code 3vin). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Beta-Glucosidase From Termite Neotermes Koshunensis in Complex with A New Glucopyranosidic Product, PDB code: 3vin:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3vin

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Chlorine Binding Sites List in 3vin

Chlorine binding site 1 out of 2 in the Crystal Structure of Beta-Glucosidase From Termite Neotermes Koshunensis in Complex with A New Glucopyranosidic Product

Mono view

Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Beta-Glucosidase From Termite Neotermes Koshunensis in Complex with A New Glucopyranosidic Product within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Cl510 b:20.7 occ:0.50	O	A:HOH969	2.8	41.2	1.0
	O	A:HOH613	3.0	15.4	1.0
	O	A:HOH797	3.7	30.8	1.0
	CB	A:ARG495	4.2	14.7	1.0
	CD	A:ARG495	4.4	15.7	1.0
	OE1	A:GLU494	4.6	15.5	1.0
	N	A:ARG495	4.6	13.3	1.0
	CG	A:ARG495	4.8	14.9	1.0
	CA	A:ARG495	4.9	14.2	1.0

Chlorine binding site 2 out of 2 in 3vin

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Chlorine Binding Sites List in 3vin

Chlorine binding site 2 out of 2 in the Crystal Structure of Beta-Glucosidase From Termite Neotermes Koshunensis in Complex with A New Glucopyranosidic Product

Mono view

Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Beta-Glucosidase From Termite Neotermes Koshunensis in Complex with A New Glucopyranosidic Product within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Cl511 b:32.7 occ:0.50	N	A:ASN262	3.4	18.4	1.0
	O	A:HOH1215	3.4	52.2	1.0
	CB	A:THR261	3.9	15.5	1.0
	CB	A:ASN262	4.0	22.8	1.0
	CA	A:THR261	4.2	15.0	1.0
	C	A:THR261	4.3	15.6	1.0
	CA	A:ASN262	4.3	19.9	1.0
	CG2	A:THR261	4.8	16.3	1.0
	O	A:HOH972	4.8	44.7	1.0
	OG1	A:THR261	4.8	16.3	1.0

Reference:

W.Y.Jeng, N.C.Wang, C.T.Lin, W.J.Chang, C.I.Liu, A.H.J.Wang. High-Resolution Structures of Neotermes Koshunensis Beta-Glucosidase Mutants Provide Insights Into the Catalytic Mechanism and the Synthesis of Glucoconjugates Acta Crystallogr.,Sect.D V. 68 829 2012.
ISSN: ISSN 0907-4449
PubMed: 22751668
DOI: 10.1107/S0907444912013224

Page generated: Fri Jul 11 11:42:56 2025

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