Chlorine in PDB 3vow: Crystal Structure of the Human APOBEC3C Having Hiv-1 Vif-Binding Interface

The structure of Crystal Structure of the Human APOBEC3C Having Hiv-1 Vif-Binding Interface, PDB code: 3vow was solved by S.Kitamura, A.Suzuki, N.Watanabe, Y.Iwatani, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	90.97 / 2.15
Space group	P 61
Cell size a, b, c (Å), α, β, γ (°)	105.042, 105.042, 70.046, 90.00, 90.00, 120.00
R / Rfree (%)	21.4 / 26.3

The structure of Crystal Structure of the Human APOBEC3C Having Hiv-1 Vif-Binding Interface also contains other interesting chemical elements:

Zinc

(Zn)

2 atoms

The binding sites of Chlorine atom in the Crystal Structure of the Human APOBEC3C Having Hiv-1 Vif-Binding Interface (pdb code 3vow). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the Human APOBEC3C Having Hiv-1 Vif-Binding Interface, PDB code: 3vow:

Chlorine binding site 1 out of 1 in the Crystal Structure of the Human APOBEC3C Having Hiv-1 Vif-Binding Interface


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Human APOBEC3C Having Hiv-1 Vif-Binding Interface within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl202 b:44.3 occ:1.00 NZ B:LYS43 3.1 29.9 1.0 N B:ARG44 3.4 37.7 1.0 CB B:LYS43 3.6 33.0 1.0 CG B:LYS43 3.7 27.6 1.0 CA B:LYS43 3.8 32.5 1.0 CA A:GLY142 3.9 35.8 1.0 CE B:LYS43 4.0 30.1 1.0 NH2 B:ARG44 4.0 63.6 1.0 CB B:ARG44 4.0 40.9 1.0 O B:ASN83 4.1 34.0 1.0 C B:LYS43 4.1 36.0 1.0 CG B:ARG44 4.1 49.3 1.0 CD B:ARG44 4.1 54.5 1.0 O A:SER139 4.3 39.6 1.0 CA B:ARG44 4.3 38.4 1.0 CD B:LYS43 4.4 30.0 1.0 OD1 B:ASN83 4.5 47.2 1.0 ND2 B:ASN83 4.7 47.7 1.0 N A:GLY142 4.7 37.0 1.0 C A:GLY142 4.8 33.8 1.0 CG B:ASN83 4.8 47.7 1.0 CZ B:ARG44 4.9 64.5 1.0 NE B:ARG44 4.9 61.2 1.0 O A:GLY142 4.9 36.9 1.0

S.Kitamura, H.Ode, M.Nakashima, M.Imahashi, Y.Naganawa, T.Kurosawa, Y.Yokomaku, T.Yamane, N.Watanabe, A.Suzuki, W.Sugiura, Y.Iwatani. The APOBEC3C Crystal Structure and the Interface For Hiv-1 Vif Binding. Nat.Struct.Mol.Biol. V. 19 1005 2012.
ISSN: ISSN 1545-9993
PubMed: 23001005
DOI: 10.1038/NSMB.2378