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Chlorine in PDB 3wif: Crystal Structure of Anti-Prostaglandin E2 Fab Fragment 9CL-PGF2BETA Complex

Protein crystallography data

The structure of Crystal Structure of Anti-Prostaglandin E2 Fab Fragment 9CL-PGF2BETA Complex, PDB code: 3wif was solved by M.Sugahara, H.Ago, H.Saino, M.Miyano, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.33 / 1.70
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 70.660, 82.310, 82.560, 90.00, 90.00, 90.00
R / Rfree (%) 17.2 / 19

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Anti-Prostaglandin E2 Fab Fragment 9CL-PGF2BETA Complex (pdb code 3wif). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Anti-Prostaglandin E2 Fab Fragment 9CL-PGF2BETA Complex, PDB code: 3wif:

Chlorine binding site 1 out of 1 in 3wif

Go back to Chlorine Binding Sites List in 3wif
Chlorine binding site 1 out of 1 in the Crystal Structure of Anti-Prostaglandin E2 Fab Fragment 9CL-PGF2BETA Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Anti-Prostaglandin E2 Fab Fragment 9CL-PGF2BETA Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:17.5
occ:1.00
CL9 A:ON5301 0.0 17.5 1.0
C9 A:ON5301 1.8 12.3 1.0
C8 A:ON5301 2.7 9.0 1.0
C10 A:ON5301 2.7 10.5 1.0
NE2 B:HIS31 3.4 23.7 1.0
C7 A:ON5301 3.4 12.3 1.0
O B:HOH364 3.6 23.9 1.0
O B:HOH498 3.6 36.0 1.0
CE2 A:TYR101 3.8 11.4 1.0
C4 A:ON5301 3.8 12.6 1.0
CE1 B:HIS31 3.9 25.3 1.0
O A:HOH513 3.9 23.9 1.0
C11 A:ON5301 4.0 10.0 1.0
C12 A:ON5301 4.0 7.9 1.0
CD2 B:HIS31 4.1 19.6 1.0
C2 A:ON5301 4.1 16.2 1.0
C6 A:ON5301 4.2 14.3 1.0
C3 A:ON5301 4.2 13.3 1.0
O B:HOH473 4.2 34.4 1.0
OH A:TYR101 4.2 16.9 1.0
CZ A:TYR101 4.3 13.8 1.0
C5 A:ON5301 4.3 14.0 1.0
CD2 A:TYR101 4.6 10.1 1.0
ND1 B:HIS31 4.7 25.5 1.0
CG B:HIS31 4.8 17.5 1.0
O B:GLY96 5.0 12.4 1.0
CE2 B:TYR37 5.0 10.1 1.0

Reference:

M.Sugahara, H.Ago, H.Saino, M.Miyano, Y.Kurahashi, S.Aoyama, M.Takehira, K.Yutani, S.Yamamoto. Crystal Structure of Anti-Prostaglandin E2 Fab Fragment with Prostaglandin E2 To Be Published.
Page generated: Fri Jul 11 11:59:17 2025

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