Chlorine in PDB 3zmo: VP16, A Capsid Protein of Bacteriophage P23-77 (VP16-Type-1)

The structure of VP16, A Capsid Protein of Bacteriophage P23-77 (VP16-Type-1), PDB code: 3zmo was solved by I.Rissanen, J.M.Grimes, A.Pawlowski, S.Mantynen, K.Harlos, J.K.H.Bamford, D.I.Stuart, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	53.56 / 1.80
Space group	P 62 2 2
Cell size a, b, c (Å), α, β, γ (°)	61.850, 61.850, 251.220, 90.00, 90.00, 120.00
R / Rfree (%)	18.9 / 21.5

The structure of VP16, A Capsid Protein of Bacteriophage P23-77 (VP16-Type-1) also contains other interesting chemical elements:

Sodium

(Na)

2 atoms

The binding sites of Chlorine atom in the VP16, A Capsid Protein of Bacteriophage P23-77 (VP16-Type-1) (pdb code 3zmo). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the VP16, A Capsid Protein of Bacteriophage P23-77 (VP16-Type-1), PDB code: 3zmo:

Chlorine binding site 1 out of 1 in the VP16, A Capsid Protein of Bacteriophage P23-77 (VP16-Type-1)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of VP16, A Capsid Protein of Bacteriophage P23-77 (VP16-Type-1) within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1174 b:23.8 occ:0.50 O A:HOH2056 3.0 27.5 1.0 NE A:ARG35 3.5 24.9 1.0 NH2 A:ARG35 3.5 24.3 1.0 CZ A:PHE89 3.8 29.6 1.0 CZ A:ARG35 3.9 27.9 1.0 CE2 A:TYR142 4.1 24.6 1.0 CE2 A:PHE89 4.3 31.3 1.0 CD2 A:TYR142 4.6 23.3 1.0 CB A:ARG35 4.6 22.9 1.0 CD A:ARG35 4.6 24.7 1.0 CZ A:TYR142 4.6 28.2 1.0 OH A:TYR142 4.8 28.3 1.0 CE1 A:PHE89 4.9 31.2 1.0

I.Rissanen, J.M.Grimes, A.Pawlowski, S.Mantynen, K.Harlos, J.K.H.Bamford, D.I.Stuart. Bacteriophage P23-77 Capsid Protein Structures Reveal the Archetype of An Ancient Branch From A Major Virus Lineage. Structure V. 21 718 2013.
ISSN: ISSN 0969-2126
PubMed: 23623731
DOI: 10.1016/J.STR.2013.02.026