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Chlorine in PDB 3zr8: Crystal Structure of Rxlr Effector AVR3A11 From Phytophthora Capsici

Protein crystallography data

The structure of Crystal Structure of Rxlr Effector AVR3A11 From Phytophthora Capsici, PDB code: 3zr8 was solved by L.S.Boutemy, S.R.F.King, J.Win, R.K.Hughes, T.A.Clarke, T.M.A.Blumenschein, S.Kamoun, M.J.Banfield, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 17.41 / 0.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 21.300, 25.330, 90.700, 90.00, 90.00, 90.00
R / Rfree (%) 12.55 / 14.865

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Rxlr Effector AVR3A11 From Phytophthora Capsici (pdb code 3zr8). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Rxlr Effector AVR3A11 From Phytophthora Capsici, PDB code: 3zr8:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 3zr8

Go back to Chlorine Binding Sites List in 3zr8
Chlorine binding site 1 out of 2 in the Crystal Structure of Rxlr Effector AVR3A11 From Phytophthora Capsici


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Rxlr Effector AVR3A11 From Phytophthora Capsici within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Cl1134

b:5.0
occ:0.80
O X:HOH2077 2.0 23.1 1.0
O X:HOH2091 3.1 8.3 1.0
NH2 X:ARG120 3.1 3.8 1.0
NE X:ARG120 3.3 3.0 1.0
CZ X:ARG120 3.7 3.3 1.0
CE X:MET83 3.9 4.7 1.0
C4 X:PGE1133 4.5 13.4 0.8
CD X:ARG120 4.5 3.4 1.0
O X:HOH2069 4.5 4.7 1.0
O3 X:PGE1133 4.8 10.1 0.8
O X:HOH2070 4.9 4.7 1.0
CB X:ARG120 4.9 3.0 1.0
SD X:MET83 5.0 3.4 1.0

Chlorine binding site 2 out of 2 in 3zr8

Go back to Chlorine Binding Sites List in 3zr8
Chlorine binding site 2 out of 2 in the Crystal Structure of Rxlr Effector AVR3A11 From Phytophthora Capsici


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Rxlr Effector AVR3A11 From Phytophthora Capsici within 5.0Å range:
probe atom residue distance (Å) B Occ
X:Cl1135

b:8.9
occ:0.80
N X:GLY68 3.2 9.7 1.0
N X:GLU71 3.4 4.9 1.0
CA X:GLY68 3.7 8.9 1.0
CB X:GLU71 3.7 4.8 1.0
C X:GLY68 3.7 7.2 1.0
O X:GLY68 3.8 6.9 1.0
CB X:THR70 3.9 7.3 1.0
N X:THR70 4.0 6.0 1.0
CA X:GLU71 4.2 5.0 1.0
CA X:THR70 4.3 6.0 1.0
C X:THR70 4.3 5.2 1.0
N X:PRO69 4.5 7.6 1.0
OG1 X:THR70 4.7 10.0 1.0
CG2 X:THR70 4.7 7.7 1.0
O X:HOH2002 4.8 18.6 1.0
C X:PRO69 4.9 6.7 1.0

Reference:

L.S.Boutemy, S.R.F.King, J.Win, R.K.Hughes, T.A.Clarke, T.M.A.Blumenschein, S.Kamoun, M.J.Banfield. Structures of Phytophthora Rxlr Effector Proteins: A Conserved But Adaptable Fold Underpins Functional Diversity. J.Biol.Chem. V. 286 35834 2011.
ISSN: ISSN 0021-9258
PubMed: 21813644
DOI: 10.1074/JBC.M111.262303
Page generated: Fri Jul 11 12:28:25 2025

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