Chlorine in PDB 4b4j: 1.25 A Structure of Lysozyme Crystallized with (Rs)-2-Methyl-2,4- Pentanediol

All present enzymatic activity of 1.25 A Structure of Lysozyme Crystallized with (Rs)-2-Methyl-2,4- Pentanediol:
3.2.1.17;

The structure of 1.25 A Structure of Lysozyme Crystallized with (Rs)-2-Methyl-2,4- Pentanediol, PDB code: 4b4j was solved by J.Jakoncic, J.Berger, M.Stauber, A.Axelbaum, N.Asherie, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	27.05 / 1.25
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	77.671, 77.671, 37.702, 90.00, 90.00, 90.00
R / Rfree (%)	13 / 15.6

The binding sites of Chlorine atom in the 1.25 A Structure of Lysozyme Crystallized with (Rs)-2-Methyl-2,4- Pentanediol (pdb code 4b4j). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the 1.25 A Structure of Lysozyme Crystallized with (Rs)-2-Methyl-2,4- Pentanediol, PDB code: 4b4j:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the 1.25 A Structure of Lysozyme Crystallized with (Rs)-2-Methyl-2,4- Pentanediol


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of 1.25 A Structure of Lysozyme Crystallized with (Rs)-2-Methyl-2,4- Pentanediol within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1130 b:17.3 occ:1.00 OG A:SER24 3.0 14.1 1.0 O A:HOH2048 3.0 33.5 1.0 NE2 A:GLN121 3.1 23.5 0.3 N A:GLY26 3.1 9.5 1.0 O A:HOH2150 3.3 32.5 1.0 CB A:SER24 3.5 12.5 1.0 CD A:GLN121 3.6 22.3 0.3 CA A:GLY26 3.6 10.1 1.0 CG A:GLN121 3.6 22.4 0.3 CA A:GLN121 3.6 15.8 0.7 CA A:GLN121 3.7 16.2 0.3 CB A:GLN121 4.0 19.1 0.7 N A:GLN121 4.0 14.8 1.0 CD1 A:ILE124 4.0 20.5 1.0 N A:LEU25 4.1 10.0 1.0 CG A:GLN121 4.2 20.2 0.7 CB A:GLN121 4.2 18.5 0.3 C A:SER24 4.2 9.8 1.0 C A:LEU25 4.3 9.7 1.0 C A:VAL120 4.3 13.1 1.0 CG2 A:VAL120 4.4 15.3 1.0 CG1 A:ILE124 4.4 18.1 1.0 O A:VAL120 4.4 12.9 1.0 OE1 A:GLN121 4.5 25.1 0.3 CA A:SER24 4.5 10.2 1.0 C A:GLY26 4.6 8.8 1.0 CA A:LEU25 4.6 9.9 1.0 O A:SER24 4.7 10.6 1.0 N A:ASN27 4.7 8.8 1.0 O A:HOH2049 4.9 20.3 0.5 C A:GLN121 4.9 14.6 1.0 CB A:LEU25 5.0 10.3 1.0 O A:HOH2033 5.0 12.8 0.5

Chlorine binding site 2 out of 2 in the 1.25 A Structure of Lysozyme Crystallized with (Rs)-2-Methyl-2,4- Pentanediol


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of 1.25 A Structure of Lysozyme Crystallized with (Rs)-2-Methyl-2,4- Pentanediol within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1131 b:13.5 occ:1.00 OH A:TYR23 3.0 10.2 1.0 O A:HOH2044 3.1 27.7 1.0 CZ A:TYR23 3.7 9.0 1.0 CE2 A:TYR23 3.7 9.4 1.0 CA A:GLY104 4.1 10.1 1.0 O A:ARG21 4.5 11.8 1.0 N A:GLY104 4.7 10.4 1.0 CE1 A:TYR23 4.9 9.3 1.0 CD2 A:TYR23 4.9 9.5 1.0

M.Stauber, J.Jakoncic, J.Berger, J.M.Karp, A.Axelbaum, D.Sastow, S.V.Buldyrev, B.J.Hrnjez, N.Asherie. Crystallization of Lysozyme with (R)-, (S)- and (Rs)-2-Methyl-2,4-Pentanediol Acta Crystallogr.,Sect.D V. 71 427 2015.
ISSN: ISSN 0907-4449
PubMed: 25760593
DOI: 10.1107/S1399004714025061