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Chlorine in PDB 4bg9: Apo Form of A Putative Sugar Kinase MK0840 From Methanopyrus Kandleri (Orthorhombic Space Group)

Protein crystallography data

The structure of Apo Form of A Putative Sugar Kinase MK0840 From Methanopyrus Kandleri (Orthorhombic Space Group), PDB code: 4bg9 was solved by M.Schacherl, S.M.Waltersperger, U.Baumann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 61.805 / 1.90
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 73.043, 115.967, 48.363, 90.00, 90.00, 90.00
R / Rfree (%) 17.87 / 20.84

Other elements in 4bg9:

The structure of Apo Form of A Putative Sugar Kinase MK0840 From Methanopyrus Kandleri (Orthorhombic Space Group) also contains other interesting chemical elements:

Potassium (K) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Apo Form of A Putative Sugar Kinase MK0840 From Methanopyrus Kandleri (Orthorhombic Space Group) (pdb code 4bg9). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Apo Form of A Putative Sugar Kinase MK0840 From Methanopyrus Kandleri (Orthorhombic Space Group), PDB code: 4bg9:

Chlorine binding site 1 out of 1 in 4bg9

Go back to Chlorine Binding Sites List in 4bg9
Chlorine binding site 1 out of 1 in the Apo Form of A Putative Sugar Kinase MK0840 From Methanopyrus Kandleri (Orthorhombic Space Group)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Apo Form of A Putative Sugar Kinase MK0840 From Methanopyrus Kandleri (Orthorhombic Space Group) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1354

b:47.5
occ:1.00
H A:GLU324 2.5 37.4 1.0
HH11 A:ARG328 2.5 38.8 1.0
HD21 A:LEU325 2.9 29.7 1.0
O A:HOH2144 3.0 39.1 1.0
HA3 A:GLY322 3.2 39.8 1.0
NH1 A:ARG328 3.3 32.3 1.0
H A:GLU323 3.3 35.9 1.0
N A:GLU324 3.3 31.1 1.0
HD3 A:ARG328 3.4 34.4 1.0
HH2 A:TRP61 3.4 34.0 1.0
HB2 A:GLU324 3.5 45.0 1.0
HA2 A:GLY322 3.6 39.8 1.0
HD2 A:ARG328 3.6 34.4 1.0
HH12 A:ARG328 3.6 38.8 1.0
N A:GLU323 3.7 29.9 1.0
CA A:GLY322 3.7 33.1 1.0
HD22 A:LEU325 3.8 29.7 1.0
CD2 A:LEU325 3.8 24.8 1.0
C A:GLU324 3.8 25.2 1.0
CA A:GLU324 3.9 32.1 1.0
CD A:ARG328 3.9 28.7 1.0
C A:GLY322 4.0 33.1 1.0
N A:LEU325 4.0 19.4 1.0
CH2 A:TRP61 4.0 28.3 1.0
H A:LEU325 4.1 23.3 1.0
CB A:GLU324 4.1 37.5 1.0
HA A:LEU325 4.2 25.4 1.0
O A:GLU324 4.2 25.6 1.0
HD23 A:LEU325 4.4 29.7 1.0
HG A:LEU325 4.4 28.6 1.0
CZ A:ARG328 4.4 34.6 1.0
C A:GLU323 4.4 37.4 1.0
HB3 A:GLU324 4.5 45.0 1.0
HZ3 A:TRP61 4.6 27.8 1.0
CA A:LEU325 4.6 21.2 1.0
HZ2 A:TRP61 4.6 31.5 1.0
NE A:ARG328 4.6 31.1 1.0
CA A:GLU323 4.6 33.6 1.0
CZ3 A:TRP61 4.7 23.1 1.0
CG A:LEU325 4.7 23.8 1.0
CZ2 A:TRP61 4.7 26.2 1.0
HB2 A:ARG328 4.8 27.1 1.0
HA A:GLU324 4.8 38.5 1.0
O A:GLY322 4.9 28.9 1.0
OE1 A:GLU324 4.9 44.7 1.0

Reference:

M.Schacherl, S.M.Waltersperger, U.Baumann. Structural Characterization of the Ribonuclease H-Like Type Askha Superfamily Kinase MK0840 From Methanopyrus Kandleri Acta Crystallogr.,Sect.D V. 69 2440 2013.
ISSN: ISSN 0907-4449
PubMed: 24311585
DOI: 10.1107/S0907444913022683
Page generated: Fri Jul 11 13:20:16 2025

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