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Chlorine in PDB 4c81: Ispf (Plasmodium Falciparum) Cdp Complex

Enzymatic activity of Ispf (Plasmodium Falciparum) Cdp Complex

All present enzymatic activity of Ispf (Plasmodium Falciparum) Cdp Complex:
4.6.1.12;

Protein crystallography data

The structure of Ispf (Plasmodium Falciparum) Cdp Complex, PDB code: 4c81 was solved by P.E.F.O'rourke, J.Kalinowska-Tluscik, P.K.Fyfe, A.Dawson, W.N.Hunter, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.38 / 1.56
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 84.864, 84.864, 101.031, 90.00, 90.00, 120.00
R / Rfree (%) 14.398 / 16.503

Other elements in 4c81:

The structure of Ispf (Plasmodium Falciparum) Cdp Complex also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Ispf (Plasmodium Falciparum) Cdp Complex (pdb code 4c81). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Ispf (Plasmodium Falciparum) Cdp Complex, PDB code: 4c81:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 4c81

Go back to Chlorine Binding Sites List in 4c81
Chlorine binding site 1 out of 3 in the Ispf (Plasmodium Falciparum) Cdp Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Ispf (Plasmodium Falciparum) Cdp Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1244

b:30.0
occ:1.00
ZN A:ZN1241 2.2 26.1 1.0
O A:HOH2085 3.2 27.2 1.0
NE2 A:HIS215 3.3 18.9 1.0
CE1 A:HIS215 3.5 23.7 1.0
CL A:CL1246 3.8 44.0 1.0
CD2 A:HIS215 4.7 18.6 1.0
O A:HOH2073 4.8 22.8 1.0
ND1 A:HIS215 4.8 17.3 1.0

Chlorine binding site 2 out of 3 in 4c81

Go back to Chlorine Binding Sites List in 4c81
Chlorine binding site 2 out of 3 in the Ispf (Plasmodium Falciparum) Cdp Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Ispf (Plasmodium Falciparum) Cdp Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1245

b:33.3
occ:1.00
OG A:SER114 2.8 37.9 0.6
N A:LYS74 2.9 18.6 1.0
ND1 A:HIS73 3.0 19.8 1.0
O A:LEU113 3.0 33.9 1.0
O A:HOH2010 3.3 31.6 1.0
CA A:HIS73 3.4 18.7 1.0
CB A:HIS73 3.5 16.7 1.0
C A:HIS73 3.7 18.3 1.0
CG A:HIS73 3.7 17.8 1.0
CB A:SER114 3.7 36.3 0.4
CB A:SER114 3.8 31.9 0.6
CB A:LYS74 3.9 21.4 1.0
CA A:LYS74 4.0 18.9 1.0
C A:LEU113 4.0 31.4 1.0
CG A:LYS74 4.0 21.1 1.0
OG A:SER114 4.1 26.9 0.4
CE1 A:HIS73 4.1 17.9 1.0
CA A:SER114 4.3 27.2 0.6
CA A:SER114 4.3 36.8 0.4
O A:LYS74 4.3 20.4 1.0
O A:ILE72 4.5 18.7 1.0
N A:SER114 4.5 32.0 1.0
CD A:LYS74 4.6 30.9 1.0
N A:HIS73 4.6 14.3 1.0
C A:LYS74 4.7 19.5 1.0
O A:HIS73 4.9 18.8 1.0
CD2 A:HIS73 4.9 16.2 1.0
O A:HOH2031 5.0 52.5 1.0

Chlorine binding site 3 out of 3 in 4c81

Go back to Chlorine Binding Sites List in 4c81
Chlorine binding site 3 out of 3 in the Ispf (Plasmodium Falciparum) Cdp Complex


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Ispf (Plasmodium Falciparum) Cdp Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1246

b:44.0
occ:1.00
ZN A:ZN1241 2.3 26.1 1.0
OE2 A:GLU228 3.4 66.7 1.0
NE2 A:HIS215 3.5 18.9 1.0
CL A:CL1244 3.8 30.0 1.0
CD2 A:HIS215 3.9 18.6 1.0
CD1 A:ILE180 4.2 22.1 1.0
CD A:GLU228 4.5 17.4 1.0
CD1 A:ILE221 4.6 22.0 1.0
CE1 A:HIS215 4.7 23.7 1.0

Reference:

P.E.O Rourke, J.Kalinowska-Tluscik, P.K.Fyfe, A.Dawson, W.N.Hunter. Crystal Structures of Ispf From Plasmodium Falciparum and Burkholderia Cenocepacia: Comparisons Inform Antimicrobial Drug Target Assessment. Bmc Struct.Biol. V. 14 1 2014.
ISSN: ISSN 1472-6807
PubMed: 24410837
DOI: 10.1186/1472-6807-14-1
Page generated: Fri Jul 11 13:46:30 2025

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