Chlorine in PDB 4cpw: Macrocyclic Transition-State Mimicking Hiv-1 Protease Inhibitors Encompassing A Tertiary Alcohol

All present enzymatic activity of Macrocyclic Transition-State Mimicking Hiv-1 Protease Inhibitors Encompassing A Tertiary Alcohol:
3.4.23.16;

The structure of Macrocyclic Transition-State Mimicking Hiv-1 Protease Inhibitors Encompassing A Tertiary Alcohol, PDB code: 4cpw was solved by M.Derosa, J.Unge, H.V.Motwani, A.Rosenquist, L.Vrang, H.Wallberg, M.Larhed, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	27.68 / 1.70
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	58.470, 86.020, 46.360, 90.00, 90.00, 90.00
R / Rfree (%)	17.057 / 19.672

The binding sites of Chlorine atom in the Macrocyclic Transition-State Mimicking Hiv-1 Protease Inhibitors Encompassing A Tertiary Alcohol (pdb code 4cpw). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Macrocyclic Transition-State Mimicking Hiv-1 Protease Inhibitors Encompassing A Tertiary Alcohol, PDB code: 4cpw:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in the Macrocyclic Transition-State Mimicking Hiv-1 Protease Inhibitors Encompassing A Tertiary Alcohol


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Macrocyclic Transition-State Mimicking Hiv-1 Protease Inhibitors Encompassing A Tertiary Alcohol within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl1100 b:18.3 occ:1.00 OD1 A:ASN88 1.8 12.6 0.3 CG A:ASN88 2.5 10.8 0.3 ND2 A:ASN88 2.7 9.8 0.3 O A:HOH2128 3.1 27.8 1.0 N A:THR74 3.2 11.4 1.0 ND2 A:ASN88 3.3 6.7 0.7 OG1 A:THR74 3.6 14.0 1.0 CB A:THR74 3.8 11.9 1.0 CA A:GLY73 3.8 10.7 1.0 CB A:ASN88 3.8 7.7 0.7 CB A:ASN88 3.9 9.7 0.3 C A:GLY73 4.0 10.3 1.0 CG A:ASN88 4.1 6.3 0.7 CA A:THR74 4.1 10.5 1.0 O A:HOH2102 4.2 20.2 1.0 O A:ASN88 4.6 8.6 1.0 O A:HOH2068 4.8 36.5 1.0 O A:THR74 4.8 10.2 1.0 CA A:ASN88 4.9 8.5 0.3 CA A:ASN88 4.9 7.8 0.7 C A:ASN88 5.0 7.5 1.0 C A:THR74 5.0 10.4 1.0

Chlorine binding site 2 out of 3 in the Macrocyclic Transition-State Mimicking Hiv-1 Protease Inhibitors Encompassing A Tertiary Alcohol


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Macrocyclic Transition-State Mimicking Hiv-1 Protease Inhibitors Encompassing A Tertiary Alcohol within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl1200 b:17.5 occ:1.00 NE1 B:TRP106 3.3 8.3 1.0 O A:HOH2130 3.3 10.6 1.0 CZ2 B:TRP106 3.9 7.0 1.0 CE2 B:TRP106 3.9 7.8 1.0 CG2 B:THR104 4.4 17.7 1.0 CD1 B:TRP106 4.4 8.4 1.0 O B:HOH2038 4.9 30.6 1.0 CB B:THR104 5.0 11.2 1.0

Chlorine binding site 3 out of 3 in the Macrocyclic Transition-State Mimicking Hiv-1 Protease Inhibitors Encompassing A Tertiary Alcohol


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Macrocyclic Transition-State Mimicking Hiv-1 Protease Inhibitors Encompassing A Tertiary Alcohol within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl1201 b:18.4 occ:1.00 O B:HOH2109 2.9 13.4 1.0 N B:THR174 3.1 6.5 1.0 ND2 B:ASN188 3.2 7.0 1.0 OG1 B:THR174 3.7 9.1 1.0 CA B:GLY173 3.8 6.4 1.0 CB B:THR174 3.8 7.4 1.0 CB B:ASN188 3.9 6.3 1.0 C B:GLY173 4.0 5.7 1.0 CG B:ASN188 4.0 6.7 1.0 CA B:THR174 4.0 6.7 1.0 O B:HOH2101 4.1 10.5 1.0 NE2 B:GLN192 4.3 8.8 1.0 O B:ASN188 4.4 9.3 1.0 O B:THR174 4.7 6.8 1.0 CD2 B:LEU189 4.7 8.5 1.0 C B:ASN188 4.7 7.4 1.0 CA B:ASN188 4.8 7.1 1.0 C B:THR174 4.9 7.0 1.0

M.De Rosa, J.Unge, H.V.Motwani, A.Rosenquist, L.Vrang, H.Wallberg, M.Larhed. Synthesis of P1'-Functionalized Macrocyclic Transition- State Mimicking Hiv-1 Protease Inhibitors Encompassing A Tertiary Alcohol. J.Med.Chem. V. 57 6444 2014.
ISSN: ISSN 0022-2623
PubMed: 25054811
DOI: 10.1021/JM500434Q