Atomistry » Chlorine » PDB 4cqc-4d0m » 4cte
Atomistry »
  Chlorine »
    PDB 4cqc-4d0m »
      4cte »

Chlorine in PDB 4cte: Crystal Structure of the Catalytic Domain of the Modular Laminarinase Zglamc Mutant E142S in Complex with A Thio- Oligosaccharide

Enzymatic activity of Crystal Structure of the Catalytic Domain of the Modular Laminarinase Zglamc Mutant E142S in Complex with A Thio- Oligosaccharide

All present enzymatic activity of Crystal Structure of the Catalytic Domain of the Modular Laminarinase Zglamc Mutant E142S in Complex with A Thio- Oligosaccharide:
3.2.1.39;

Protein crystallography data

The structure of Crystal Structure of the Catalytic Domain of the Modular Laminarinase Zglamc Mutant E142S in Complex with A Thio- Oligosaccharide, PDB code: 4cte was solved by A.Labourel, M.Jam, L.Legentil, B.Sylla, E.Ficko-Blean, J.H.Hehemann, V.Ferrieres, M.Czjzek, G.Michel, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.11 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 56.010, 93.930, 142.280, 90.00, 90.00, 90.00
R / Rfree (%) 17.718 / 22.221

Other elements in 4cte:

The structure of Crystal Structure of the Catalytic Domain of the Modular Laminarinase Zglamc Mutant E142S in Complex with A Thio- Oligosaccharide also contains other interesting chemical elements:

Calcium (Ca) 2 atoms
Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Catalytic Domain of the Modular Laminarinase Zglamc Mutant E142S in Complex with A Thio- Oligosaccharide (pdb code 4cte). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the Catalytic Domain of the Modular Laminarinase Zglamc Mutant E142S in Complex with A Thio- Oligosaccharide, PDB code: 4cte:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4cte

Go back to Chlorine Binding Sites List in 4cte
Chlorine binding site 1 out of 2 in the Crystal Structure of the Catalytic Domain of the Modular Laminarinase Zglamc Mutant E142S in Complex with A Thio- Oligosaccharide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Catalytic Domain of the Modular Laminarinase Zglamc Mutant E142S in Complex with A Thio- Oligosaccharide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl261

b:44.0
occ:1.00
 N A:LYS254 3.2 48.6 1.0
CA A:GLN253 3.6 37.5 1.0
N A:GLY102 3.6 42.1 1.0
CA A:GLY102 3.7 40.2 1.0
CG A:LYS254 3.7 74.8 1.0
CB A:GLN253 3.8 39.1 1.0
CB A:TYR101 3.9 40.3 1.0
O A:HOH2140 3.9 57.0 1.0
CG A:GLN253 3.9 39.5 1.0
C A:GLN253 3.9 42.2 1.0
C A:TYR101 4.1 40.5 1.0
CE1 A:TYR25 4.2 54.0 1.0
CA A:LYS254 4.3 53.1 1.0
CB A:LYS254 4.5 64.6 1.0
O A:TRP185 4.5 48.3 1.0
O A:TYR101 4.5 39.7 1.0
NZ A:LYS254 4.6 92.9 1.0
CA A:TYR101 4.6 37.7 1.0
O A:TYR252 4.8 41.8 1.0
C A:GLY102 4.8 40.4 1.0
CD1 A:TYR25 4.9 49.5 1.0
N A:GLN253 4.9 38.5 1.0
CD A:GLN253 4.9 40.7 1.0
CD A:LYS254 4.9 90.0 1.0
C A:LYS254 4.9 58.0 1.0

Chlorine binding site 2 out of 2 in 4cte

Go back to Chlorine Binding Sites List in 4cte
Chlorine binding site 2 out of 2 in the Crystal Structure of the Catalytic Domain of the Modular Laminarinase Zglamc Mutant E142S in Complex with A Thio- Oligosaccharide


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Catalytic Domain of the Modular Laminarinase Zglamc Mutant E142S in Complex with A Thio- Oligosaccharide within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl281

b:43.4
occ:1.00
 O B:HOH2035 2.9 42.1 1.0
O B:HOH2193 3.0 43.5 1.0
N B:TYR49 3.0 22.7 1.0
CA B:TRP52 3.4 20.4 1.0
C B:TRP52 3.7 21.2 1.0
CB B:TYR49 3.7 25.1 1.0
CE3 B:TRP52 3.8 18.3 1.0
CA B:TYR49 3.8 23.7 1.0
CA B:GLY48 3.8 21.9 1.0
O B:TYR49 3.8 22.8 1.0
C B:GLY48 3.9 21.7 1.0
N B:GLY53 3.9 20.8 1.0
N B:TRP52 4.2 18.8 1.0
CD2 B:TRP52 4.3 18.3 1.0
C B:TYR49 4.3 22.2 1.0
O B:TRP52 4.4 22.4 1.0
CZ3 B:TRP52 4.4 17.9 1.0
CB B:TRP52 4.5 19.9 1.0
CG B:TRP52 4.6 18.7 1.0
CA B:GLY53 4.7 22.4 1.0
O6 B:GS1301 4.8 28.8 0.7
O4 B:GS1301 4.9 34.3 0.7
CG B:TYR49 5.0 26.8 1.0
O B:HOH2014 5.0 42.9 1.0

Reference:

A.Labourel, M.Jam, L.Legentil, B.Sylla, J.H.Hehemann, V.Ferrieres, M.Czjzek, G.Michel. Structural and Biochemical Characterization of the Laminarina Zglamc[GH16] From Zobellia Galactanivorans Suggests Preferred Recognition of Branched Laminarin Acta Crystallogr.,Sect.D V. 71 173 2015.
ISSN: ISSN 0907-4449
DOI: 10.1107/S139900471402450X
Page generated: Sun Jul 21 11:33:38 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy