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Chlorine in PDB 4cvc: Crystal Structure of Quinone-Dependent Alcohol Dehydrogenase From Pseudogluconobacter Saccharoketogenenes with Zinc in the Active Site

Enzymatic activity of Crystal Structure of Quinone-Dependent Alcohol Dehydrogenase From Pseudogluconobacter Saccharoketogenenes with Zinc in the Active Site

All present enzymatic activity of Crystal Structure of Quinone-Dependent Alcohol Dehydrogenase From Pseudogluconobacter Saccharoketogenenes with Zinc in the Active Site:
1.1.2.8;

Protein crystallography data

The structure of Crystal Structure of Quinone-Dependent Alcohol Dehydrogenase From Pseudogluconobacter Saccharoketogenenes with Zinc in the Active Site, PDB code: 4cvc was solved by H.J.Rozeboom, S.Yu, R.Mikkelsen, I.Nikolaev, H.Mulder, B.W.Dijkstra, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 72.08 / 1.83
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 128.220, 87.160, 57.000, 90.00, 90.29, 90.00
R / Rfree (%) 16.109 / 18.405

Other elements in 4cvc:

The structure of Crystal Structure of Quinone-Dependent Alcohol Dehydrogenase From Pseudogluconobacter Saccharoketogenenes with Zinc in the Active Site also contains other interesting chemical elements:

Zinc (Zn) 7 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Quinone-Dependent Alcohol Dehydrogenase From Pseudogluconobacter Saccharoketogenenes with Zinc in the Active Site (pdb code 4cvc). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Quinone-Dependent Alcohol Dehydrogenase From Pseudogluconobacter Saccharoketogenenes with Zinc in the Active Site, PDB code: 4cvc:

Chlorine binding site 1 out of 1 in 4cvc

Go back to Chlorine Binding Sites List in 4cvc
Chlorine binding site 1 out of 1 in the Crystal Structure of Quinone-Dependent Alcohol Dehydrogenase From Pseudogluconobacter Saccharoketogenenes with Zinc in the Active Site


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Quinone-Dependent Alcohol Dehydrogenase From Pseudogluconobacter Saccharoketogenenes with Zinc in the Active Site within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl1616

b:12.2
occ:1.00
 ZN A:ZN1611 2.5 9.3 1.0
OD1 A:ASN113 3.2 9.8 1.0
O A:HOH2046 3.3 29.0 1.0
ND2 A:ASN62 3.3 9.5 1.0
ND2 A:ASN113 3.4 9.8 1.0
O A:HOH2027 3.4 17.4 1.0
O A:HOH2010 3.5 8.0 1.0
ND2 A:ASN65 3.6 8.0 1.0
OD1 A:ASP57 3.7 11.8 1.0
CG A:ASN113 3.7 9.6 1.0
O A:HOH2028 3.8 26.2 1.0
CE1 A:TYR112 4.1 8.8 1.0
OH A:TYR112 4.3 9.7 1.0
O A:HOH2018 4.3 6.3 1.0
CG A:ASN62 4.4 9.3 1.0
CZ A:TYR112 4.5 9.2 1.0
CB A:ASN62 4.7 9.2 1.0
CG A:ASP57 4.8 11.0 1.0
CG A:ASN65 4.9 7.7 1.0
CD1 A:TYR112 4.9 8.4 1.0

Reference:

H.J.Rozeboom, S.Yu, R.Mikkelsen, I.Nikolaev, H.Mulder, B.W.Dijkstra. Crystal Structure of Quinone-Dependent Alcohol Dehydrogenase Form Pseudogluconobacter Saccharoketogenenes To Be Published.
Page generated: Fri Jul 11 14:08:20 2025

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