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Chlorine in PDB 4dgf: Structure of Sulp Transporter Stas Domain From Wolinella Succinogenes Refined to 1.6 Angstrom Resolution

Protein crystallography data

The structure of Structure of Sulp Transporter Stas Domain From Wolinella Succinogenes Refined to 1.6 Angstrom Resolution, PDB code: 4dgf was solved by J.P.Keller, C.Chang, C.Tesar, J.Bearden, P.Dallos, A.Joachimiak, Midwestcenter For Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 59.41 / 1.60
Space group P 2 21 21
Cell size a, b, c (Å), α, β, γ (°) 37.710, 71.865, 105.570, 90.00, 90.00, 90.00
R / Rfree (%) 20.6 / 24.4

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Structure of Sulp Transporter Stas Domain From Wolinella Succinogenes Refined to 1.6 Angstrom Resolution (pdb code 4dgf). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Structure of Sulp Transporter Stas Domain From Wolinella Succinogenes Refined to 1.6 Angstrom Resolution, PDB code: 4dgf:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4dgf

Go back to Chlorine Binding Sites List in 4dgf
Chlorine binding site 1 out of 2 in the Structure of Sulp Transporter Stas Domain From Wolinella Succinogenes Refined to 1.6 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Structure of Sulp Transporter Stas Domain From Wolinella Succinogenes Refined to 1.6 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl601

b:15.0
occ:0.95
OG A:SER520 3.0 10.0 0.5
O A:HOH720 3.1 20.3 1.0
NE A:ARG488 3.2 12.6 1.0
OG A:SER520 3.3 12.6 0.5
CB A:ARG488 3.5 10.6 1.0
CA A:GLY521 3.6 12.7 1.0
C A:SER520 3.6 11.7 0.5
N A:GLY521 3.6 11.6 1.0
NH2 A:ARG488 3.6 14.4 1.0
N A:ARG490 3.6 11.7 1.0
C A:SER520 3.7 11.3 0.5
O A:SER520 3.7 10.6 0.5
O A:SER520 3.7 10.9 0.5
N A:MSE489 3.7 9.2 0.5
N A:MSE489 3.7 10.5 0.5
CB A:ARG490 3.7 13.2 1.0
CG A:ARG490 3.8 14.9 1.0
CB A:SER520 3.8 11.4 0.5
CA A:ARG488 3.8 10.3 1.0
CG A:ARG488 3.9 11.3 1.0
CZ A:ARG488 3.9 13.8 1.0
CB A:SER520 3.9 10.2 0.5
CD A:ARG490 4.0 15.8 1.0
C A:ARG488 4.1 9.7 1.0
CD A:ARG488 4.1 12.0 1.0
CA A:ARG490 4.2 12.9 1.0
CA A:SER520 4.3 11.8 0.5
CB A:ILE548 4.4 12.6 1.0
CA A:SER520 4.4 11.2 0.5
C A:MSE489 4.6 10.4 0.5
N A:ILE548 4.6 12.6 1.0
C A:MSE489 4.6 12.1 0.5
NE A:ARG490 4.6 17.3 1.0
CA A:MSE489 4.8 12.1 0.5
C A:GLY521 4.8 11.8 1.0
CA A:MSE489 4.8 9.5 0.5
CA A:ILE548 4.8 13.1 1.0

Chlorine binding site 2 out of 2 in 4dgf

Go back to Chlorine Binding Sites List in 4dgf
Chlorine binding site 2 out of 2 in the Structure of Sulp Transporter Stas Domain From Wolinella Succinogenes Refined to 1.6 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Structure of Sulp Transporter Stas Domain From Wolinella Succinogenes Refined to 1.6 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl601

b:13.7
occ:0.96
O B:HOH728 3.0 22.3 1.0
OG B:SER520 3.0 9.9 0.5
NE B:ARG488 3.2 12.2 1.0
OG B:SER520 3.3 11.1 0.5
CA B:GLY521 3.6 14.0 1.0
C B:SER520 3.6 11.5 0.5
N B:GLY521 3.6 11.4 1.0
CB B:ARG490 3.6 16.5 1.0
O B:SER520 3.6 11.1 0.5
C B:SER520 3.6 11.4 0.5
NH2 B:ARG488 3.6 14.5 1.0
O B:SER520 3.6 10.9 0.5
CG B:ARG490 3.6 16.8 1.0
CB B:ARG488 3.7 10.2 1.0
N B:ARG490 3.7 14.0 1.0
CA B:ARG488 3.8 10.3 1.0
N B:MSE489 3.8 12.0 0.5
N B:MSE489 3.8 10.6 0.5
CZ B:ARG488 3.8 14.2 1.0
CG B:ARG488 3.9 10.3 1.0
CB B:SER520 3.9 11.7 0.5
CB B:SER520 3.9 11.1 0.5
CD B:ARG490 4.1 18.6 1.0
C B:ARG488 4.1 11.4 1.0
CD B:ARG488 4.2 10.4 1.0
CA B:ARG490 4.2 15.0 1.0
CA B:SER520 4.3 10.9 0.5
CB B:ILE548 4.4 15.0 1.0
CA B:SER520 4.4 10.7 0.5
N B:ILE548 4.5 15.5 1.0
C B:MSE489 4.6 14.1 0.5
C B:MSE489 4.6 12.2 0.5
NE B:ARG490 4.7 18.3 1.0
CA B:MSE489 4.8 14.1 0.5
C B:GLY521 4.8 13.2 1.0
CA B:ILE548 4.8 14.0 1.0
CA B:MSE489 4.8 11.1 0.5

Reference:

J.P.Keller, C.Chang, P.Dallos, A.Joachimiak. Structure of Sulp Transporter Stas Domain From Wolinella Succinogenes Refined to 1.6 Angstrom Resolution To Be Published.
Page generated: Fri Jul 11 14:22:08 2025

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