Chlorine in PDB 4dhe: Crystal Structure of A Probable Gtp-Binding Protein Engb From Burkholderia Thailandensis

The structure of Crystal Structure of A Probable Gtp-Binding Protein Engb From Burkholderia Thailandensis, PDB code: 4dhe was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.78 / 2.20
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	48.940, 76.960, 134.410, 90.00, 90.00, 90.00
R / Rfree (%)	23.5 / 27.4

The binding sites of Chlorine atom in the Crystal Structure of A Probable Gtp-Binding Protein Engb From Burkholderia Thailandensis (pdb code 4dhe). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of A Probable Gtp-Binding Protein Engb From Burkholderia Thailandensis, PDB code: 4dhe:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in the Crystal Structure of A Probable Gtp-Binding Protein Engb From Burkholderia Thailandensis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Probable Gtp-Binding Protein Engb From Burkholderia Thailandensis within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl301 b:42.8 occ:1.00 NE1 A:TRP98 3.1 24.8 1.0 O A:HOH483 3.3 28.7 1.0 N A:GLN62 3.6 29.8 1.0 O A:HOH441 3.7 33.4 1.0 CD1 A:TRP98 3.9 25.3 1.0 CA A:THR61 3.9 30.2 1.0 CB A:THR61 4.0 30.5 1.0 CE2 A:TRP98 4.1 24.4 1.0 CB A:ALA94 4.1 32.0 1.0 CG2 A:THR61 4.3 31.0 1.0 C A:THR61 4.3 29.9 1.0 CG A:GLN62 4.3 30.5 1.0 O A:GLN62 4.4 28.3 1.0 CZ2 A:TRP98 4.4 23.8 1.0 NE2 A:GLN62 4.5 30.2 1.0 CA A:GLN62 4.7 29.2 1.0 O A:ARG60 4.7 30.8 1.0 C A:GLN62 4.9 28.5 1.0

Chlorine binding site 2 out of 3 in the Crystal Structure of A Probable Gtp-Binding Protein Engb From Burkholderia Thailandensis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Probable Gtp-Binding Protein Engb From Burkholderia Thailandensis within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl302 b:33.4 occ:1.00 N A:ALA188 3.1 34.3 1.0 N A:LYS149 3.3 29.8 1.0 CB A:ALA188 3.5 34.7 1.0 CB A:THR148 3.7 27.4 1.0 CD2 A:PHE186 3.9 29.2 1.0 O A:PHE186 3.9 31.0 1.0 CA A:SER187 3.9 33.7 1.0 CA A:ALA188 3.9 35.2 1.0 C A:SER187 4.0 34.3 1.0 CA A:THR148 4.1 28.1 1.0 CA A:LYS149 4.1 30.4 1.0 CE2 A:PHE186 4.1 29.0 1.0 CG2 A:THR148 4.1 27.0 1.0 C A:THR148 4.2 29.1 1.0 CG A:LYS149 4.3 30.7 1.0 C A:PHE186 4.4 31.8 1.0 N A:SER187 4.4 32.8 1.0 CB A:LYS149 4.8 31.0 1.0 OG1 A:THR148 4.9 26.8 1.0 NZ A:LYS149 5.0 32.0 1.0 CG A:PHE186 5.0 30.0 1.0

Chlorine binding site 3 out of 3 in the Crystal Structure of A Probable Gtp-Binding Protein Engb From Burkholderia Thailandensis


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A Probable Gtp-Binding Protein Engb From Burkholderia Thailandensis within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl303 b:28.7 occ:1.00 NZ A:LYS149 3.0 32.0 1.0 OG1 A:THR148 3.1 26.8 1.0 O A:HOH465 3.2 22.2 1.0 O A:HOH431 3.3 22.3 1.0 CG2 A:THR148 3.6 27.0 1.0 CB A:THR148 3.7 27.4 1.0 CA A:GLY37 3.8 25.7 1.0 CE A:MET118 4.2 27.4 1.0 O A:HOH480 4.2 25.9 1.0 CB A:MET118 4.2 26.7 1.0 CB A:SER34 4.2 26.5 1.0 C A:GLY37 4.4 25.5 1.0 CE A:LYS149 4.5 31.6 1.0 C A:MET118 4.5 26.1 1.0 O A:MET118 4.5 26.1 1.0 N A:ASP120 4.5 26.2 1.0 N A:GLY37 4.6 25.4 1.0 OG A:SER34 4.7 26.3 1.0 N A:MET119 4.7 25.9 1.0 O A:GLY37 4.9 24.7 1.0 N A:LYS38 4.9 25.4 1.0 C A:MET119 4.9 26.4 1.0 O A:SER34 4.9 25.2 1.0 CA A:MET118 4.9 26.4 1.0

L.Baugh, L.A.Gallagher, R.Patrapuvich, M.C.Clifton, A.S.Gardberg, T.E.Edwards, B.Armour, D.W.Begley, S.H.Dieterich, D.M.Dranow, J.Abendroth, J.W.Fairman, D.Fox, B.L.Staker, I.Phan, A.Gillespie, R.Choi, S.Nakazawa-Hewitt, M.T.Nguyen, A.Napuli, L.Barrett, G.W.Buchko, R.Stacy, P.J.Myler, L.J.Stewart, C.Manoil, W.C.Van Voorhis. Combining Functional and Structural Genomics to Sample the Essential Burkholderia Structome. Plos One V. 8 53851 2013.
ISSN: ESSN 1932-6203
PubMed: 23382856
DOI: 10.1371/JOURNAL.PONE.0053851