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Chlorine in PDB 4du5: Crystal Structure of Pfkb Protein From Polaromonas Sp. JS666

Protein crystallography data

The structure of Crystal Structure of Pfkb Protein From Polaromonas Sp. JS666, PDB code: 4du5 was solved by R.Agarwal, S.Chamala, B.Evans, R.Foti, A.Gizzi, B.Hellerich, A.Kar, J.Lafleur, R.Siedel, G.Villigas, W.Zencheck, S.C.Almo, S.Swaminathan, Newyork Structural Genomics Research Consortium (Nysgrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.68 / 2.70
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 82.923, 83.084, 196.202, 90.00, 90.00, 90.00
R / Rfree (%) 22.6 / 29.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Pfkb Protein From Polaromonas Sp. JS666 (pdb code 4du5). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Pfkb Protein From Polaromonas Sp. JS666, PDB code: 4du5:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4du5

Go back to Chlorine Binding Sites List in 4du5
Chlorine binding site 1 out of 2 in the Crystal Structure of Pfkb Protein From Polaromonas Sp. JS666


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Pfkb Protein From Polaromonas Sp. JS666 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl401

b:29.6
occ:1.00
O A:HOH522 3.0 25.6 1.0
NH1 A:ARG194 3.3 49.3 1.0
NH2 A:ARG132 3.4 46.7 1.0
CE A:MSE36 3.5 46.2 1.0
N A:ALA60 3.7 27.9 1.0
CA A:GLY59 3.8 30.0 1.0
CG1 A:VAL161 4.1 27.8 1.0
C A:GLY59 4.3 30.0 1.0
CZ A:ARG132 4.3 45.2 1.0
CB A:ALA60 4.4 27.2 1.0
NH1 A:ARG132 4.4 41.7 1.0
CG2 A:VAL161 4.5 30.1 1.0
N A:GLY59 4.5 30.0 1.0
CA A:ALA60 4.6 27.2 1.0
CZ A:ARG194 4.7 49.4 1.0
CB A:VAL161 4.8 29.4 1.0

Chlorine binding site 2 out of 2 in 4du5

Go back to Chlorine Binding Sites List in 4du5
Chlorine binding site 2 out of 2 in the Crystal Structure of Pfkb Protein From Polaromonas Sp. JS666


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Pfkb Protein From Polaromonas Sp. JS666 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl401

b:27.1
occ:1.00
NH2 C:ARG132 3.3 32.1 1.0
CE C:MSE36 3.6 38.6 1.0
N C:ALA60 3.8 22.3 1.0
NH2 C:ARG194 4.0 42.8 1.0
CA C:GLY59 4.0 23.8 1.0
CG1 C:VAL161 4.0 20.8 1.0
NE C:ARG194 4.1 40.0 1.0
CZ C:ARG132 4.4 31.9 1.0
C C:GLY59 4.4 24.2 1.0
N C:GLY59 4.4 24.1 1.0
CB C:ALA60 4.5 22.0 1.0
CZ C:ARG194 4.6 41.8 1.0
CA C:ALA60 4.7 21.5 1.0
CG2 C:VAL161 4.8 23.1 1.0
NH1 C:ARG132 4.8 29.4 1.0
CB C:VAL161 5.0 22.8 1.0

Reference:

R.Agarwal, S.C.Almo, S.Swaminathan. Crystal Structure of Pfkb Protein From Polaromonas Sp. JS666 To Be Published.
Page generated: Fri Jul 11 14:31:22 2025

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