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Chlorine in PDB 4dyv: Crystal Structure of A Short-Chain Dehydrogenase/Reductase Sdr From Xanthobacter Autotrophicus PY2

Protein crystallography data

The structure of Crystal Structure of A Short-Chain Dehydrogenase/Reductase Sdr From Xanthobacter Autotrophicus PY2, PDB code: 4dyv was solved by R.Agarwal, S.Chamala, B.Evans, R.Foti, B.Hillerich, A.Kar, J.Lafleur, R.Siedel, G.Villigas, W.Zencheck, A.Gizzi, S.C.Almo, S.Swaminathan, Newyork Structural Genomics Research Consortium (Nysgrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 35.95 / 1.80
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 71.901, 83.046, 93.503, 90.00, 90.00, 90.00
R / Rfree (%) 16.6 / 20.5

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Short-Chain Dehydrogenase/Reductase Sdr From Xanthobacter Autotrophicus PY2 (pdb code 4dyv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of A Short-Chain Dehydrogenase/Reductase Sdr From Xanthobacter Autotrophicus PY2, PDB code: 4dyv:

Chlorine binding site 1 out of 1 in 4dyv

Go back to Chlorine Binding Sites List in 4dyv
Chlorine binding site 1 out of 1 in the Crystal Structure of A Short-Chain Dehydrogenase/Reductase Sdr From Xanthobacter Autotrophicus PY2


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Short-Chain Dehydrogenase/Reductase Sdr From Xanthobacter Autotrophicus PY2 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl301

b:24.8
occ:1.00
O A:HOH503 3.0 36.3 1.0
OG A:SER164 3.0 15.5 1.0
O A:HOH442 3.1 23.5 1.0
O A:HOH477 3.3 25.2 1.0
CB A:SER164 3.5 15.6 1.0
ND1 A:HIS182 3.6 15.7 1.0
CB A:LYS181 3.7 14.9 1.0
CE1 A:HIS182 3.8 14.6 1.0
CA A:THR178 3.9 12.5 1.0
CG2 A:THR178 4.0 12.9 1.0
O A:THR178 4.0 13.2 1.0
CB A:THR178 4.3 11.8 1.0
C A:THR178 4.4 13.5 1.0
OG1 A:THR178 4.5 13.4 1.0
CE2 A:TYR177 4.5 17.2 1.0
N A:HIS182 4.6 11.4 1.0
O A:SER166 4.6 21.1 1.0
CD2 A:TYR177 4.7 13.8 1.0
CG A:LYS181 4.7 13.8 1.0
CA A:SER164 4.8 14.0 1.0
O A:TYR177 4.8 14.4 1.0
O A:HOH419 4.8 19.7 1.0
C A:LYS181 4.9 11.7 1.0
CA A:LYS181 4.9 12.4 1.0
CG A:HIS182 4.9 13.4 1.0
N A:THR178 4.9 13.3 1.0
NE2 A:HIS182 5.0 17.2 1.0

Reference:

R.Agarwal, S.C.Almo, S.Swaminathan. Crystal Structure of A Short-Chain Dehydrogenase/Reductase Sdr From Xanthobacter Autotrophicus PY2 To Be Published.
Page generated: Sun Jul 21 12:24:12 2024

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