Atomistry » Chlorine » PDB 4e9w-4ego » 4een
Atomistry »
  Chlorine »
    PDB 4e9w-4ego »
      4een »

Chlorine in PDB 4een: Crystal Structure of Had Family Hydrolase DR_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) with Bound Magnesium

Protein crystallography data

The structure of Crystal Structure of Had Family Hydrolase DR_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) with Bound Magnesium, PDB code: 4een was solved by Y.Patskovsky, R.Toro, R.Bhosle, B.Hillerich, R.D.Seidel, E.Washington, A.Scott Glenn, S.Chowdhury, B.Evans, J.Hammonds, W.D.Zencheck, H.J.Imker, J.A.Gerlt, K.N.Allen, D.Dunaway-Mariano, S.C.Almo, Enzyme Functioninitiative (Efi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.03 / 1.65
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 55.456, 55.456, 274.172, 90.00, 90.00, 120.00
R / Rfree (%) 20.2 / 23.5

Other elements in 4een:

The structure of Crystal Structure of Had Family Hydrolase DR_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) with Bound Magnesium also contains other interesting chemical elements:

Magnesium (Mg) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Had Family Hydrolase DR_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) with Bound Magnesium (pdb code 4een). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Had Family Hydrolase DR_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) with Bound Magnesium, PDB code: 4een:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in 4een

Go back to Chlorine Binding Sites List in 4een
Chlorine binding site 1 out of 3 in the Crystal Structure of Had Family Hydrolase DR_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) with Bound Magnesium


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Had Family Hydrolase DR_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) with Bound Magnesium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:24.9
occ:1.00
N A:ASN112 3.1 21.7 1.0
CL A:CL303 3.1 34.8 1.0
O A:HOH405 3.1 24.9 1.0
NZ A:LYS146 3.3 19.8 1.0
O A:HOH404 3.3 21.2 1.0
CD A:LYS146 3.6 19.7 1.0
OD1 A:ASP12 3.6 20.1 1.0
CE A:LYS146 3.7 19.2 1.0
CB A:ASN112 3.7 21.1 1.0
CA A:SER111 3.8 21.4 1.0
C A:SER111 3.9 19.9 1.0
CA A:ASN112 4.0 21.2 1.0
CG A:ASN112 4.1 21.4 1.0
O A:HOH551 4.2 38.3 1.0
OG A:SER111 4.2 23.1 1.0
OD1 A:ASN112 4.5 22.8 1.0
CB A:SER111 4.5 20.0 1.0
O A:HOH406 4.5 38.0 1.0
O A:HOH403 4.6 22.4 1.0
ND2 A:ASN112 4.6 22.4 1.0
O A:GLY110 4.7 23.9 1.0
CG A:ASP12 4.8 18.5 1.0
CG A:LYS146 4.9 18.5 1.0
N A:SER113 4.9 21.9 1.0
C A:ASN112 4.9 21.6 1.0
N A:SER111 5.0 20.9 1.0
O A:HOH519 5.0 39.1 1.0

Chlorine binding site 2 out of 3 in 4een

Go back to Chlorine Binding Sites List in 4een
Chlorine binding site 2 out of 3 in the Crystal Structure of Had Family Hydrolase DR_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) with Bound Magnesium


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Had Family Hydrolase DR_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) with Bound Magnesium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:34.8
occ:1.00
OG A:SER111 2.7 23.1 1.0
OD1 A:ASP14 3.0 38.0 1.0
CL A:CL302 3.1 24.9 1.0
O A:HOH404 3.1 21.2 1.0
N A:ASP14 3.2 19.4 1.0
CB A:SER111 3.4 20.0 1.0
CB A:LEU13 3.4 19.8 1.0
CG A:ASP14 3.5 28.4 1.0
OD1 A:ASP12 3.6 20.1 1.0
CB A:ASP14 3.7 19.7 1.0
CA A:SER111 3.8 21.4 1.0
N A:LEU13 3.9 19.6 1.0
CA A:LEU13 4.0 19.9 1.0
C A:LEU13 4.1 22.9 1.0
CA A:ASP14 4.1 19.7 1.0
CD2 A:LEU13 4.1 23.0 1.0
OG A:SER113 4.1 26.8 1.0
N A:ASN112 4.2 21.7 1.0
OD2 A:ASP14 4.2 32.1 1.0
CG A:LEU13 4.2 21.9 1.0
C A:SER111 4.5 19.9 1.0
CG A:ASP12 4.6 18.5 1.0
N A:SER113 4.7 21.9 1.0
O A:GLY110 4.8 23.9 1.0
NZ A:LYS146 4.9 19.8 1.0

Chlorine binding site 3 out of 3 in 4een

Go back to Chlorine Binding Sites List in 4een
Chlorine binding site 3 out of 3 in the Crystal Structure of Had Family Hydrolase DR_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) with Bound Magnesium


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Had Family Hydrolase DR_1622 From Deinococcus Radiodurans R1 (Target Efi-501256) with Bound Magnesium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:44.5
occ:1.00
O A:HOH459 2.8 35.1 1.0
N A:ALA94 2.8 23.6 1.0
O A:ILE90 3.0 25.2 1.0
N A:ALA93 3.2 26.8 1.0
O A:HOH516 3.3 39.5 1.0
CB A:ALA94 3.4 22.9 1.0
CB A:ALA89 3.6 26.0 1.0
OE1 A:GLU95 3.6 33.0 1.0
N A:GLY92 3.6 25.8 1.0
CA A:ALA94 3.7 24.0 1.0
C A:ALA93 3.8 25.5 1.0
CA A:ALA93 3.8 24.7 1.0
CB A:ALA93 3.9 22.3 1.0
C A:GLY92 3.9 22.9 1.0
C A:ILE90 4.1 26.7 1.0
CA A:GLY92 4.2 28.5 1.0
C A:GLU91 4.3 27.0 1.0
CA A:GLU91 4.5 29.6 1.0
O A:HOH506 4.5 48.1 1.0
O A:HOH458 4.6 48.1 1.0
C A:ALA89 4.6 25.8 1.0
N A:GLU95 4.7 29.4 1.0
CA A:ALA89 4.7 29.1 1.0
N A:GLU91 4.7 27.5 1.0
CD A:GLU95 4.7 54.8 1.0
C A:ALA94 4.8 28.3 1.0
O A:GLY92 4.8 24.2 1.0
CD2 A:LEU127 4.8 27.9 1.0
N A:ILE90 4.9 25.1 1.0
O A:ALA89 4.9 29.9 1.0
O A:ALA93 4.9 23.1 1.0
O A:HOH460 5.0 44.5 1.0

Reference:

Y.Patskovsky, R.Toro, R.Bhosle, B.Hillerich, R.D.Seidel, E.Washington, A.Scott Glenn, S.Chowdhury, B.Evans, J.Hammonds, W.D.Zencheck, H.J.Imker, K.N.Allen, D.Dunaway-Mariano, J.A.Gerlt, S.C.Almo. Crystal Structure of Had Hydrolase DR_1622 Deinococcus Radiodurans R1 (Target Efi-501256) To Be Published.
Page generated: Fri Jul 11 14:47:27 2025

Last articles

Mg in 4GMJ
Mg in 4GNK
Mg in 4GNI
Mg in 4GN0
Mg in 4GMX
Mg in 4GME
Mg in 4GKM
Mg in 4GKR
Mg in 4GHL
Mg in 4GIU
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy