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Chlorine in PDB 4ex9: Crystal Structure of the Prealnumycin C-Glycosynthase Alna in Complex with Ribulose 5-Phosphate

Protein crystallography data

The structure of Crystal Structure of the Prealnumycin C-Glycosynthase Alna in Complex with Ribulose 5-Phosphate, PDB code: 4ex9 was solved by T.Oja, L.Niiranen, T.Sandalova, K.D.Klika, J.Niemi, P.Mantsala, G.Schneider, M.Metsa-Ketela, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 3.15
Space group I 41 3 2
Cell size a, b, c (Å), α, β, γ (°) 168.790, 168.790, 168.790, 90.00, 90.00, 90.00
R / Rfree (%) 22 / 24.8

Other elements in 4ex9:

The structure of Crystal Structure of the Prealnumycin C-Glycosynthase Alna in Complex with Ribulose 5-Phosphate also contains other interesting chemical elements:

Calcium (Ca) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Prealnumycin C-Glycosynthase Alna in Complex with Ribulose 5-Phosphate (pdb code 4ex9). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of the Prealnumycin C-Glycosynthase Alna in Complex with Ribulose 5-Phosphate, PDB code: 4ex9:

Chlorine binding site 1 out of 1 in 4ex9

Go back to Chlorine Binding Sites List in 4ex9
Chlorine binding site 1 out of 1 in the Crystal Structure of the Prealnumycin C-Glycosynthase Alna in Complex with Ribulose 5-Phosphate


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Prealnumycin C-Glycosynthase Alna in Complex with Ribulose 5-Phosphate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl405

b:71.7
occ:1.00
NZ A:LYS86 3.2 74.2 1.0
O A:HOH502 3.5 50.9 1.0
CE A:LYS86 3.8 74.2 1.0
OG A:SER31 4.3 99.8 1.0

Reference:

T.Oja, L.Niiranen, T.Sandalova, K.D.Klika, J.Niemi, P.Mantsala, G.Schneider, M.Metsa-Ketela. Structural Basis For C-Ribosylation in the Alnumycin A Biosynthetic Pathway. Proc.Natl.Acad.Sci.Usa V. 110 1291 2013.
ISSN: ISSN 0027-8424
PubMed: 23297194
DOI: 10.1073/PNAS.1207407110
Page generated: Fri Jul 11 15:05:07 2025

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