Atomistry » Chlorine » PDB 4eu6-4f1a » 4exl
Atomistry »
  Chlorine »
    PDB 4eu6-4f1a »
      4exl »

Chlorine in PDB 4exl: Crystal Structure of Phosphate Abc Transporter, Periplasmic Phosphate- Binding Protein Psts 1 (PBP1) From Streptococcus Pneumoniae Canada MDR_19A

Protein crystallography data

The structure of Crystal Structure of Phosphate Abc Transporter, Periplasmic Phosphate- Binding Protein Psts 1 (PBP1) From Streptococcus Pneumoniae Canada MDR_19A, PDB code: 4exl was solved by P.J.Stogios, Z.Wawrzak, M.Kudritska, G.Minasov, V.Yim, A.Savchenko, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.85 / 1.70
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 56.633, 76.501, 111.066, 90.00, 93.88, 90.00
R / Rfree (%) 16.5 / 21.1

Other elements in 4exl:

The structure of Crystal Structure of Phosphate Abc Transporter, Periplasmic Phosphate- Binding Protein Psts 1 (PBP1) From Streptococcus Pneumoniae Canada MDR_19A also contains other interesting chemical elements:

Magnesium (Mg) 6 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Phosphate Abc Transporter, Periplasmic Phosphate- Binding Protein Psts 1 (PBP1) From Streptococcus Pneumoniae Canada MDR_19A (pdb code 4exl). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 7 binding sites of Chlorine where determined in the Crystal Structure of Phosphate Abc Transporter, Periplasmic Phosphate- Binding Protein Psts 1 (PBP1) From Streptococcus Pneumoniae Canada MDR_19A, PDB code: 4exl:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5; 6; 7;

Chlorine binding site 1 out of 7 in 4exl

Go back to Chlorine Binding Sites List in 4exl
Chlorine binding site 1 out of 7 in the Crystal Structure of Phosphate Abc Transporter, Periplasmic Phosphate- Binding Protein Psts 1 (PBP1) From Streptococcus Pneumoniae Canada MDR_19A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Phosphate Abc Transporter, Periplasmic Phosphate- Binding Protein Psts 1 (PBP1) From Streptococcus Pneumoniae Canada MDR_19A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl304

b:26.5
occ:0.92
 N A:ASP119 2.9 22.2 1.0
N A:LYS145 3.1 24.5 1.0
NZ A:LYS145 3.2 41.9 1.0
CB A:ASP119 3.4 31.9 1.0
CA A:GLY144 3.5 20.6 1.0
CA A:ASP119 3.6 26.7 1.0
N A:VAL120 3.7 18.8 1.0
CE A:LYS145 3.8 45.1 1.0
C A:GLY144 3.9 22.3 1.0
CB A:TRP139 3.9 18.4 1.0
C A:VAL118 3.9 19.9 1.0
CG2 A:VAL120 4.0 21.3 1.0
CB A:LYS145 4.0 35.3 1.0
CA A:VAL118 4.1 16.5 1.0
CG A:ASP119 4.1 42.8 1.0
C A:ASP119 4.2 25.0 1.0
CA A:LYS145 4.2 29.8 1.0
CG A:LYS145 4.2 38.7 1.0
CG1 A:VAL118 4.2 17.0 1.0
OD2 A:ASP119 4.4 48.9 1.0
CG A:TRP139 4.4 19.3 1.0
CD A:LYS145 4.6 60.0 1.0
O A:GLU117 4.6 21.6 1.0
O A:LYS145 4.6 25.6 1.0
CB A:VAL118 4.7 15.0 1.0
CB A:VAL120 4.7 17.2 1.0
CA A:VAL120 4.8 17.9 1.0
N A:GLY144 4.8 23.6 1.0
C A:LYS145 4.9 27.4 1.0
OD1 A:ASP119 4.9 46.5 1.0
CD2 A:TRP139 5.0 17.7 1.0

Chlorine binding site 2 out of 7 in 4exl

Go back to Chlorine Binding Sites List in 4exl
Chlorine binding site 2 out of 7 in the Crystal Structure of Phosphate Abc Transporter, Periplasmic Phosphate- Binding Protein Psts 1 (PBP1) From Streptococcus Pneumoniae Canada MDR_19A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Phosphate Abc Transporter, Periplasmic Phosphate- Binding Protein Psts 1 (PBP1) From Streptococcus Pneumoniae Canada MDR_19A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl305

b:12.5
occ:0.55
 O A:HOH433 3.1 15.9 1.0
O A:HOH572 3.1 25.6 1.0
O A:HOH451 3.2 18.8 1.0
CA A:SER233 3.5 12.0 1.0
N A:TYR234 3.6 10.0 1.0
CB A:SER233 3.6 16.4 1.0
CE1 A:PHE88 3.6 17.0 1.0
CE A:LYS279 3.7 15.5 1.0
CD2 A:TYR234 3.9 11.2 1.0
C A:SER233 4.0 12.0 1.0
CD1 A:PHE88 4.1 18.3 1.0
NZ A:LYS279 4.4 15.1 1.0
O A:TRP232 4.5 12.2 1.0
CE2 A:TYR234 4.6 12.5 1.0
CG A:TYR234 4.7 11.9 1.0
CB A:TYR234 4.7 11.4 1.0
CA A:TYR234 4.7 10.0 1.0
O A:HOH455 4.8 17.4 1.0
CZ A:PHE88 4.8 14.6 1.0
N A:SER233 4.8 10.6 1.0
O A:HOH577 4.8 36.4 1.0
CD A:LYS279 4.9 20.8 1.0
OG A:SER233 5.0 15.5 1.0

Chlorine binding site 3 out of 7 in 4exl

Go back to Chlorine Binding Sites List in 4exl
Chlorine binding site 3 out of 7 in the Crystal Structure of Phosphate Abc Transporter, Periplasmic Phosphate- Binding Protein Psts 1 (PBP1) From Streptococcus Pneumoniae Canada MDR_19A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Phosphate Abc Transporter, Periplasmic Phosphate- Binding Protein Psts 1 (PBP1) From Streptococcus Pneumoniae Canada MDR_19A within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl302

b:21.3
occ:0.97
 N B:ASP119 3.1 18.6 1.0
O B:HOH782 3.2 28.1 1.0
N B:LYS145 3.3 19.2 1.0
O B:HOH788 3.3 31.1 0.7
N B:VAL120 3.6 19.5 1.0
CA B:GLY144 3.6 20.9 1.0
CG2 B:VAL120 3.7 20.7 1.0
CA B:ASP119 3.9 20.6 1.0
CB B:ASP119 3.9 25.2 1.0
C B:GLY144 4.0 19.1 1.0
C B:VAL118 4.1 19.1 1.0
CA B:VAL118 4.1 18.8 1.0
CB B:TRP139 4.2 16.0 1.0
CB B:LYS145 4.2 24.0 1.0
C B:ASP119 4.2 22.3 1.0
CG1 B:VAL118 4.3 15.0 1.0
CA B:LYS145 4.3 21.7 1.0
CG B:LYS145 4.3 48.6 1.0
CB B:VAL120 4.4 18.9 1.0
O B:GLU117 4.6 21.7 1.0
CA B:VAL120 4.6 19.3 1.0
CG B:TRP139 4.7 14.2 1.0
O B:LYS145 4.7 19.4 1.0
CG B:ASP119 4.8 29.0 1.0
CB B:VAL118 4.8 16.9 1.0
N B:GLY144 4.9 21.5 1.0

Chlorine binding site 4 out of 7 in 4exl

Go back to Chlorine Binding Sites List in 4exl
Chlorine binding site 4 out of 7 in the Crystal Structure of Phosphate Abc Transporter, Periplasmic Phosphate- Binding Protein Psts 1 (PBP1) From Streptococcus Pneumoniae Canada MDR_19A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of Phosphate Abc Transporter, Periplasmic Phosphate- Binding Protein Psts 1 (PBP1) From Streptococcus Pneumoniae Canada MDR_19A within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl303

b:15.2
occ:1.00
 O B:HOH509 3.2 16.6 1.0
O B:HOH594 3.3 19.4 1.0
O B:HOH434 3.3 16.9 1.0
N B:TYR234 3.4 12.0 1.0
CA B:SER233 3.5 10.2 1.0
CB B:SER233 3.6 15.0 1.0
CE1 B:PHE88 3.7 15.1 1.0
CE B:LYS279 3.8 12.1 1.0
CD2 B:TYR234 3.9 15.4 1.0
C B:SER233 3.9 12.1 1.0
O B:HOH435 4.0 15.7 1.0
NZ B:LYS279 4.2 11.4 1.0
CD1 B:PHE88 4.2 15.6 1.0
O B:TRP232 4.4 13.5 1.0
OG1 B:THR163 4.4 21.2 1.0
CB B:TYR234 4.5 12.4 1.0
CA B:TYR234 4.5 12.2 1.0
CG B:TYR234 4.5 14.3 1.0
O B:HOH496 4.6 17.0 1.0
CE2 B:TYR234 4.6 16.7 1.0
N B:SER233 4.7 11.0 1.0
CZ B:PHE88 4.7 14.9 1.0
CD B:LYS279 4.9 13.3 1.0
O B:HOH653 4.9 21.2 1.0
OG B:SER233 4.9 15.8 1.0
CB B:THR163 5.0 20.1 1.0
O B:TYR234 5.0 14.5 1.0

Chlorine binding site 5 out of 7 in 4exl

Go back to Chlorine Binding Sites List in 4exl
Chlorine binding site 5 out of 7 in the Crystal Structure of Phosphate Abc Transporter, Periplasmic Phosphate- Binding Protein Psts 1 (PBP1) From Streptococcus Pneumoniae Canada MDR_19A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of Phosphate Abc Transporter, Periplasmic Phosphate- Binding Protein Psts 1 (PBP1) From Streptococcus Pneumoniae Canada MDR_19A within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl302

b:28.0
occ:1.00
 N C:ASP119 3.0 25.0 1.0
O C:HOH622 3.2 36.5 1.0
N C:LYS145 3.2 21.9 1.0
CE C:LYS145 3.4 42.8 1.0
CA C:GLY144 3.6 19.4 1.0
N C:VAL120 3.6 19.9 1.0
CG C:LYS145 3.6 35.6 1.0
CA C:ASP119 3.8 27.2 1.0
CB C:ASP119 3.9 32.8 1.0
C C:GLY144 3.9 21.3 1.0
CG2 C:VAL120 4.0 31.0 1.0
C C:VAL118 4.0 24.8 1.0
C C:ASP119 4.1 22.0 1.0
CD C:LYS145 4.1 42.1 1.0
CA C:VAL118 4.1 22.7 1.0
CB C:TRP139 4.1 19.9 1.0
CB C:LYS145 4.2 32.5 1.0
CA C:LYS145 4.2 27.0 1.0
CG1 C:VAL118 4.3 18.2 1.0
O C:GLU117 4.5 30.0 1.0
NZ C:LYS145 4.6 45.6 1.0
CB C:VAL120 4.7 27.8 1.0
CG C:TRP139 4.7 18.8 1.0
CA C:VAL120 4.7 20.7 1.0
CG C:ASP119 4.7 38.8 1.0
O C:LYS145 4.7 22.2 1.0
CB C:VAL118 4.8 18.6 1.0
OD2 C:ASP119 4.9 40.3 1.0
N C:GLY144 4.9 19.2 1.0
O C:HOH624 4.9 41.9 1.0
C C:LYS145 4.9 21.5 1.0
O C:HOH625 5.0 42.4 1.0

Chlorine binding site 6 out of 7 in 4exl

Go back to Chlorine Binding Sites List in 4exl
Chlorine binding site 6 out of 7 in the Crystal Structure of Phosphate Abc Transporter, Periplasmic Phosphate- Binding Protein Psts 1 (PBP1) From Streptococcus Pneumoniae Canada MDR_19A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 6 of Crystal Structure of Phosphate Abc Transporter, Periplasmic Phosphate- Binding Protein Psts 1 (PBP1) From Streptococcus Pneumoniae Canada MDR_19A within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl302

b:28.2
occ:0.86
 O D:HOH583 3.1 32.2 1.0
O D:HOH450 3.1 31.6 1.0
O D:HOH490 3.2 22.5 1.0
N D:TYR234 3.4 20.0 1.0
CA D:SER233 3.5 19.1 1.0
CE1 D:PHE88 3.6 24.1 1.0
CB D:SER233 3.6 21.3 1.0
CD2 D:TYR234 3.9 26.0 1.0
CE D:LYS279 3.9 24.9 1.0
C D:SER233 4.0 19.9 1.0
CD1 D:PHE88 4.1 25.7 1.0
O D:HOH552 4.4 30.0 1.0
NZ D:LYS279 4.4 25.2 1.0
CB D:TYR234 4.5 23.7 1.0
CG D:TYR234 4.6 23.8 1.0
CA D:TYR234 4.6 22.2 1.0
O D:TRP232 4.6 19.7 1.0
O D:HOH540 4.6 37.1 1.0
CZ D:PHE88 4.6 25.0 1.0
CE2 D:TYR234 4.7 26.6 1.0
N D:SER233 4.8 18.1 1.0
CD D:LYS279 4.9 26.8 1.0
OG D:SER233 4.9 23.0 1.0
CG D:LYS279 5.0 23.2 1.0

Chlorine binding site 7 out of 7 in 4exl

Go back to Chlorine Binding Sites List in 4exl
Chlorine binding site 7 out of 7 in the Crystal Structure of Phosphate Abc Transporter, Periplasmic Phosphate- Binding Protein Psts 1 (PBP1) From Streptococcus Pneumoniae Canada MDR_19A


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 7 of Crystal Structure of Phosphate Abc Transporter, Periplasmic Phosphate- Binding Protein Psts 1 (PBP1) From Streptococcus Pneumoniae Canada MDR_19A within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl303

b:27.4
occ:0.86
 N D:ASP119 3.1 30.2 1.0
N D:LYS145 3.2 28.3 1.0
CG D:LYS145 3.6 36.1 1.0
CA D:GLY144 3.6 25.7 1.0
N D:VAL120 3.6 24.4 1.0
O D:HOH604 3.6 46.4 1.0
CE D:LYS145 3.8 49.2 1.0
CA D:ASP119 3.9 33.2 1.0
C D:GLY144 3.9 27.8 1.0
CB D:ASP119 3.9 37.6 1.0
CG2 D:VAL120 4.0 23.4 1.0
CB D:TRP139 4.1 23.5 1.0
C D:VAL118 4.1 28.4 1.0
CA D:VAL118 4.2 29.2 1.0
C D:ASP119 4.2 28.9 1.0
CD D:LYS145 4.3 50.4 1.0
CA D:LYS145 4.3 29.8 1.0
CB D:LYS145 4.3 35.2 1.0
CG1 D:VAL118 4.4 24.3 1.0
CB D:VAL120 4.6 23.9 1.0
O D:LYS145 4.6 27.0 1.0
CG D:TRP139 4.6 23.1 1.0
O D:GLU117 4.7 31.3 1.0
CA D:VAL120 4.7 24.5 1.0
CG D:ASP119 4.8 41.4 1.0
N D:GLY144 4.8 23.8 1.0
CB D:VAL118 4.9 26.7 1.0
C D:LYS145 4.9 28.6 1.0

Reference:

P.J.Stogios, Z.Wawrzak, M.Kudritska, G.Minasov, V.Yim, A.Savchenko, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid). Crystal Structure of Phosphate Abc Transporter, Periplasmic Phosphate-Binding Protein Psts 1 (PBP1) From Streptococcus Pneumoniae Canada MDR_19A To Be Published.
Page generated: Fri Jul 11 15:05:12 2025

Last articles

Cu in 3RE7
Cu in 3T6V
Cu in 3SBR
Cu in 3SBP
Cu in 3T6Q
Cu in 3T5W
Cu in 3T56
Cu in 3T53
Cu in 3T51
Cu in 3T0U
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy