Atomistry » Chlorine » PDB 4f1b-4fbx » 4fbl
Atomistry »
  Chlorine »
    PDB 4f1b-4fbx »
      4fbl »

Chlorine in PDB 4fbl: Lips and Lipt, Two Metagenome-Derived Lipolytic Enzymes Increase the Diversity of Known Lipase and Esterase Families

Protein crystallography data

The structure of Lips and Lipt, Two Metagenome-Derived Lipolytic Enzymes Increase the Diversity of Known Lipase and Esterase Families, PDB code: 4fbl was solved by J.Chow, U.Krauss, Y.Dall Antonia, F.Fersini, C.Schmeisser, M.Schmidt, I.Menyes, U.Bornscheuer, B.Lauinger, P.Bongen, J.Pietruszka, M.Eckstein, O.Thum, A.Liese, J.Mueller-Dieckmann, K.-E.Jaeger, F.Kovacic, W.R.Streit, Structural Proteomics In Europe (Spine), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.30 / 1.99
Space group P 4
Cell size a, b, c (Å), α, β, γ (°) 105.270, 105.270, 120.980, 90.00, 90.00, 90.00
R / Rfree (%) 17.6 / 21.7

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Lips and Lipt, Two Metagenome-Derived Lipolytic Enzymes Increase the Diversity of Known Lipase and Esterase Families (pdb code 4fbl). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 4 binding sites of Chlorine where determined in the Lips and Lipt, Two Metagenome-Derived Lipolytic Enzymes Increase the Diversity of Known Lipase and Esterase Families, PDB code: 4fbl:
Jump to Chlorine binding site number: 1; 2; 3; 4;

Chlorine binding site 1 out of 4 in 4fbl

Go back to Chlorine Binding Sites List in 4fbl
Chlorine binding site 1 out of 4 in the Lips and Lipt, Two Metagenome-Derived Lipolytic Enzymes Increase the Diversity of Known Lipase and Esterase Families


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Lips and Lipt, Two Metagenome-Derived Lipolytic Enzymes Increase the Diversity of Known Lipase and Esterase Families within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:29.3
occ:1.00
O A:HOH495 2.2 25.1 1.0
N A:MET127 3.1 14.7 1.0
C9 A:SPD301 3.1 35.3 1.0
N A:PHE58 3.1 18.0 1.0
CB A:SER126 3.2 20.9 1.0
CB A:PHE58 3.4 18.4 1.0
CB A:MET127 3.6 14.0 1.0
C8 A:SPD301 3.7 36.4 1.0
N10 A:SPD301 3.7 25.5 1.0
OG A:SER126 3.8 30.7 1.0
CA A:PHE58 3.9 18.0 1.0
CA A:MET127 3.9 16.6 1.0
CA A:GLY57 4.0 16.1 1.0
C A:GLY57 4.1 17.1 1.0
C A:SER126 4.1 18.4 1.0
CD1 A:LEU201 4.2 20.1 1.0
O A:PHE58 4.2 16.3 1.0
CA A:SER126 4.3 19.3 1.0
CD1 A:ILE176 4.5 53.4 1.0
CG A:PHE58 4.6 21.3 1.0
C A:PHE58 4.6 16.8 1.0
CB A:ALA152 4.8 19.7 1.0
CD2 A:PHE58 4.8 22.8 1.0
O A:LEU125 5.0 12.9 1.0

Chlorine binding site 2 out of 4 in 4fbl

Go back to Chlorine Binding Sites List in 4fbl
Chlorine binding site 2 out of 4 in the Lips and Lipt, Two Metagenome-Derived Lipolytic Enzymes Increase the Diversity of Known Lipase and Esterase Families


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Lips and Lipt, Two Metagenome-Derived Lipolytic Enzymes Increase the Diversity of Known Lipase and Esterase Families within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl302

b:35.2
occ:1.00
O B:HOH488 2.3 24.6 1.0
N B:PHE58 3.1 21.5 1.0
CB B:SER126 3.1 20.3 1.0
N B:MET127 3.2 15.6 1.0
C9 B:SPD301 3.2 37.2 1.0
CB B:PHE58 3.4 21.8 1.0
CB B:MET127 3.7 14.3 1.0
N10 B:SPD301 3.8 32.1 1.0
CA B:PHE58 3.8 21.6 1.0
C8 B:SPD301 3.9 37.3 1.0
OG B:SER126 4.0 29.7 1.0
C B:GLY57 4.0 21.7 1.0
CA B:MET127 4.0 16.1 1.0
O B:PHE58 4.1 22.8 1.0
CA B:GLY57 4.1 19.7 1.0
C B:SER126 4.1 18.5 1.0
CA B:SER126 4.2 19.9 1.0
CD1 B:LEU201 4.3 17.9 1.0
C B:PHE58 4.5 21.3 1.0
CG B:PHE58 4.6 18.0 1.0
CD1 B:ILE176 4.8 51.4 1.0
CB B:ALA152 4.8 20.0 1.0
CD2 B:PHE58 4.9 19.4 1.0
O B:LEU125 5.0 17.3 1.0
CG B:MET127 5.0 14.7 1.0

Chlorine binding site 3 out of 4 in 4fbl

Go back to Chlorine Binding Sites List in 4fbl
Chlorine binding site 3 out of 4 in the Lips and Lipt, Two Metagenome-Derived Lipolytic Enzymes Increase the Diversity of Known Lipase and Esterase Families


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Lips and Lipt, Two Metagenome-Derived Lipolytic Enzymes Increase the Diversity of Known Lipase and Esterase Families within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl302

b:34.5
occ:1.00
O C:HOH568 2.3 22.2 1.0
CB C:SER126 3.1 20.1 1.0
N C:MET127 3.1 16.1 1.0
C9 C:SPD301 3.2 45.4 1.0
N C:PHE58 3.3 19.9 1.0
CB C:PHE58 3.4 19.6 1.0
N10 C:SPD301 3.6 41.1 1.0
CB C:MET127 3.7 14.2 1.0
OG C:SER126 3.9 28.4 1.0
CA C:PHE58 4.0 19.2 1.0
CA C:MET127 4.0 15.8 1.0
C C:SER126 4.0 18.1 1.0
O C:PHE58 4.2 20.5 1.0
CA C:SER126 4.2 20.6 1.0
CA C:GLY57 4.2 17.8 1.0
C C:GLY57 4.2 19.6 1.0
CD1 C:LEU201 4.2 18.0 1.0
C8 C:SPD301 4.3 48.6 1.0
CG C:PHE58 4.6 20.7 1.0
C C:PHE58 4.6 17.9 1.0
CB C:ALA152 4.6 16.6 1.0
CD1 C:ILE176 4.7 48.0 1.0
CD2 C:PHE58 4.9 17.7 1.0
O C:LEU125 5.0 16.6 1.0

Chlorine binding site 4 out of 4 in 4fbl

Go back to Chlorine Binding Sites List in 4fbl
Chlorine binding site 4 out of 4 in the Lips and Lipt, Two Metagenome-Derived Lipolytic Enzymes Increase the Diversity of Known Lipase and Esterase Families


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Lips and Lipt, Two Metagenome-Derived Lipolytic Enzymes Increase the Diversity of Known Lipase and Esterase Families within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Cl301

b:33.4
occ:1.00
O D:HOH464 2.4 26.9 1.0
N D:MET127 3.0 19.7 1.0
CB D:SER126 3.1 24.2 1.0
N D:PHE58 3.1 23.4 1.0
CB D:PHE58 3.3 22.9 1.0
CB D:MET127 3.6 18.4 1.0
CA D:PHE58 3.8 22.6 1.0
CA D:MET127 3.9 18.8 1.0
C D:SER126 4.0 21.1 1.0
OG D:SER126 4.0 30.7 1.0
C D:GLY57 4.1 25.0 1.0
CA D:SER126 4.1 21.9 1.0
CA D:GLY57 4.2 23.7 1.0
O D:PHE58 4.2 21.1 1.0
CD1 D:LEU201 4.4 18.1 1.0
CB D:ALA152 4.5 22.7 1.0
C D:PHE58 4.6 22.2 1.0
CG D:PHE58 4.6 18.6 1.0
O D:LEU125 4.9 23.2 1.0

Reference:

J.Chow, F.Kovacic, Y.Dall Antonia, U.Krauss, F.Fersini, C.Schmeisser, B.Lauinger, P.Bongen, J.Pietruszka, M.Schmidt, I.Menyes, U.T.Bornscheuer, M.Eckstein, O.Thum, A.Liese, J.Mueller-Dieckmann, K.E.Jaeger, W.R.Streit. The Metagenome-Derived Enzymes Lips and Lipt Increase the Diversity of Known Lipases. Plos One V. 7 47665 2012.
ISSN: ESSN 1932-6203
PubMed: 23112831
DOI: 10.1371/JOURNAL.PONE.0047665
Page generated: Sun Jul 21 13:38:02 2024

Last articles

Zn in 9MJ5
Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy