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Chlorine in PDB 4fdw: Crystal Structure of A Putative Cell Surface Protein (BACOVA_01565) From Bacteroides Ovatus Atcc 8483 at 2.05 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Putative Cell Surface Protein (BACOVA_01565) From Bacteroides Ovatus Atcc 8483 at 2.05 A Resolution, PDB code: 4fdw was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.80 / 2.05
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 79.140, 112.320, 55.990, 90.00, 90.00, 90.00
R / Rfree (%) 18.1 / 22

Other elements in 4fdw:

The structure of Crystal Structure of A Putative Cell Surface Protein (BACOVA_01565) From Bacteroides Ovatus Atcc 8483 at 2.05 A Resolution also contains other interesting chemical elements:

Cadmium (Cd) 15 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Putative Cell Surface Protein (BACOVA_01565) From Bacteroides Ovatus Atcc 8483 at 2.05 A Resolution (pdb code 4fdw). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Crystal Structure of A Putative Cell Surface Protein (BACOVA_01565) From Bacteroides Ovatus Atcc 8483 at 2.05 A Resolution, PDB code: 4fdw:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in 4fdw

Go back to Chlorine Binding Sites List in 4fdw
Chlorine binding site 1 out of 5 in the Crystal Structure of A Putative Cell Surface Protein (BACOVA_01565) From Bacteroides Ovatus Atcc 8483 at 2.05 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Putative Cell Surface Protein (BACOVA_01565) From Bacteroides Ovatus Atcc 8483 at 2.05 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl516

b:48.0
occ:1.00
 NE2 A:HIS124 2.8 40.4 1.0
N A:ILE146 3.0 35.0 1.0
CE1 A:HIS124 3.5 41.7 1.0
O A:HOH683 3.5 40.7 1.0
CA A:ILE145 3.6 35.6 1.0
CD A:PRO127 3.6 32.9 1.0
OG A:SER126 3.7 40.2 1.0
C A:ILE145 3.8 38.3 1.0
O A:GLU144 3.8 40.8 1.0
CA A:ILE146 4.0 34.4 1.0
CB A:ILE146 4.0 38.3 1.0
O A:ILE146 4.0 30.7 1.0
CD2 A:HIS124 4.0 39.7 1.0
CA A:SER126 4.1 30.5 1.0
CB A:SER126 4.1 34.0 1.0
CG1 A:ILE146 4.2 39.9 1.0
CD A:CD513 4.4 91.7 0.5
CB A:ILE145 4.4 39.4 1.0
N A:ILE145 4.4 35.0 1.0
C A:ILE146 4.5 34.2 1.0
C A:GLU144 4.5 40.0 1.0
CG2 A:ILE145 4.5 40.8 1.0
CG1 A:ILE145 4.6 40.2 1.0
CG A:PRO127 4.7 37.5 1.0
N A:PRO127 4.7 32.1 1.0
ND1 A:HIS124 4.7 42.4 1.0
CD1 A:ILE146 4.8 52.1 1.0
C A:SER126 4.9 32.4 1.0
O A:ILE145 5.0 36.5 1.0

Chlorine binding site 2 out of 5 in 4fdw

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Chlorine binding site 2 out of 5 in the Crystal Structure of A Putative Cell Surface Protein (BACOVA_01565) From Bacteroides Ovatus Atcc 8483 at 2.05 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Putative Cell Surface Protein (BACOVA_01565) From Bacteroides Ovatus Atcc 8483 at 2.05 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl517

b:68.3
occ:0.70
 O A:HOH853 3.0 75.7 1.0
N A:GLU144 3.3 37.5 1.0
N A:ASN143 3.4 41.7 1.0
O A:GLU144 3.6 40.8 1.0
CD A:CD513 3.7 91.7 0.5
CB A:ASN143 4.0 45.4 1.0
CA A:ASN143 4.0 41.2 1.0
C A:TYR142 4.1 44.7 1.0
CA A:TYR142 4.1 40.6 1.0
C A:ASN143 4.1 43.0 1.0
CA A:GLU144 4.1 36.4 1.0
CD2 A:TYR142 4.2 40.9 1.0
CB A:GLU144 4.2 37.7 1.0
CB A:TYR142 4.2 39.8 1.0
C A:GLU144 4.3 40.0 1.0
CG A:TYR142 4.7 40.6 1.0

Chlorine binding site 3 out of 5 in 4fdw

Go back to Chlorine Binding Sites List in 4fdw
Chlorine binding site 3 out of 5 in the Crystal Structure of A Putative Cell Surface Protein (BACOVA_01565) From Bacteroides Ovatus Atcc 8483 at 2.05 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A Putative Cell Surface Protein (BACOVA_01565) From Bacteroides Ovatus Atcc 8483 at 2.05 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl518

b:33.7
occ:1.00
 CD A:CD504 2.5 31.6 0.8
O A:HOH606 3.0 24.7 1.0
N A:ASN371 3.2 31.6 1.0
OD1 A:ASN370 3.3 36.9 1.0
CB A:ASN371 3.4 30.8 1.0
CA A:GLY344 3.6 25.4 1.0
O A:SER367 3.6 31.7 1.0
CA A:ASN371 3.8 31.8 1.0
N A:ASN370 3.9 28.3 1.0
CA A:GLY347 3.9 30.8 1.0
O A:HOH605 3.9 24.3 1.0
O A:HOH603 3.9 20.6 1.0
O A:HOH706 4.0 43.0 1.0
O A:ALA368 4.1 28.2 1.0
C A:ASN371 4.2 35.3 1.0
C A:PHE369 4.2 30.1 1.0
O A:ASN371 4.2 36.7 1.0
C A:ALA368 4.3 29.9 1.0
N A:GLY347 4.3 30.6 1.0
C A:ASN370 4.3 34.2 1.0
CA A:PHE369 4.3 25.4 1.0
N A:PHE369 4.4 26.0 1.0
CG A:ASN370 4.4 42.1 1.0
N A:GLY344 4.4 26.4 1.0
C A:GLY344 4.4 31.0 1.0
C A:SER367 4.6 33.3 1.0
CA A:ASN370 4.6 30.0 1.0
CG2 A:THR372 4.7 26.4 1.0
CG A:ASN371 4.7 45.3 1.0
OG A:SER367 4.8 29.2 0.4
O A:GLY344 4.9 30.6 1.0
ND2 A:ASN371 4.9 33.5 1.0
O A:PHE369 5.0 29.0 1.0
N A:THR372 5.0 31.2 1.0

Chlorine binding site 4 out of 5 in 4fdw

Go back to Chlorine Binding Sites List in 4fdw
Chlorine binding site 4 out of 5 in the Crystal Structure of A Putative Cell Surface Protein (BACOVA_01565) From Bacteroides Ovatus Atcc 8483 at 2.05 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of A Putative Cell Surface Protein (BACOVA_01565) From Bacteroides Ovatus Atcc 8483 at 2.05 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl519

b:75.7
occ:1.00
 O A:HOH833 2.8 64.6 1.0
O A:HOH750 2.9 48.3 1.0
NZ A:LYS221 3.4 79.5 1.0
N A:SER246 3.4 27.2 1.0
O A:HOH720 3.4 47.6 1.0
CA A:GLY245 3.6 22.3 1.0
CB A:ALA224 3.7 31.2 1.0
C A:GLY245 4.0 28.0 1.0
CB A:SER246 4.1 30.6 1.0
N A:ALA224 4.3 30.9 1.0
CA A:ALA224 4.3 30.1 1.0
CE A:LYS221 4.4 71.3 1.0
CA A:SER246 4.4 27.3 1.0
O A:HOH742 4.4 47.6 1.0
N A:GLY245 4.9 22.7 1.0

Chlorine binding site 5 out of 5 in 4fdw

Go back to Chlorine Binding Sites List in 4fdw
Chlorine binding site 5 out of 5 in the Crystal Structure of A Putative Cell Surface Protein (BACOVA_01565) From Bacteroides Ovatus Atcc 8483 at 2.05 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of A Putative Cell Surface Protein (BACOVA_01565) From Bacteroides Ovatus Atcc 8483 at 2.05 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl520

b:46.3
occ:0.50
 N A:ASP312 2.9 36.2 1.0
CB A:ASP312 3.6 40.8 1.0
CA A:ASN311 3.7 36.0 1.0
CA A:ASP312 3.8 37.1 1.0
C A:ASN311 3.8 37.8 1.0
O A:ASP312 4.1 42.9 1.0
O A:PHE310 4.2 43.5 1.0
C A:ASP312 4.4 41.2 1.0
CB A:ASN311 4.5 33.5 1.0
OD1 A:ASN311 4.7 57.0 1.0
N A:ASN311 4.7 36.7 1.0
C A:PHE310 4.8 41.5 1.0
CG A:ASP312 4.8 59.9 1.0
O A:ASN311 5.0 35.3 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Fri Jul 11 15:11:22 2025

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