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Chlorine in PDB 4g5i: Crystal Structure of Porcine Pancreatic PLA2 in Complex with Dbp

Enzymatic activity of Crystal Structure of Porcine Pancreatic PLA2 in Complex with Dbp

All present enzymatic activity of Crystal Structure of Porcine Pancreatic PLA2 in Complex with Dbp:
3.1.1.4;

Protein crystallography data

The structure of Crystal Structure of Porcine Pancreatic PLA2 in Complex with Dbp, PDB code: 4g5i was solved by G.K.Prasanth, C.D.Naveen, P.K.Mandal, P.Karthe, M.Haridas, C.Sadasivan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 9.94 / 2.40
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 68.860, 68.860, 70.180, 90.00, 90.00, 120.00
R / Rfree (%) 18.2 / 24.3

Other elements in 4g5i:

The structure of Crystal Structure of Porcine Pancreatic PLA2 in Complex with Dbp also contains other interesting chemical elements:

Calcium (Ca) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Porcine Pancreatic PLA2 in Complex with Dbp (pdb code 4g5i). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Porcine Pancreatic PLA2 in Complex with Dbp, PDB code: 4g5i:

Chlorine binding site 1 out of 1 in 4g5i

Go back to Chlorine Binding Sites List in 4g5i
Chlorine binding site 1 out of 1 in the Crystal Structure of Porcine Pancreatic PLA2 in Complex with Dbp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Porcine Pancreatic PLA2 in Complex with Dbp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl204

b:64.5
occ:1.00
CA A:CA203 3.2 66.5 1.0
O A:HOH383 3.6 18.9 1.0
CG A:ARG6 4.2 46.9 1.0
O A:PRO18 4.4 65.8 1.0
CA A:LEU19 4.6 68.4 1.0
CB A:ASN23 4.6 54.2 1.0
C A:PRO18 4.6 67.7 1.0
CD A:ARG6 4.7 53.4 1.0
N A:LEU19 4.8 68.4 1.0
N A:ASN23 4.8 53.0 1.0
CD1 A:ILE9 5.0 38.7 1.0
CA A:ASN23 5.0 52.4 1.0

Reference:

G.K.Prasanth, C.D.Naveen, P.K.Mandal, P.Karthe, M.Haridas, C.Sadasivan. Crystal Structure of Porcine Pancreatic PLA2 in Complex with Dbp To Be Published.
Page generated: Sun Jul 21 14:18:26 2024

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