Chlorine in PDB 4gaw: Crystal Structure of Active Human Granzyme H

The structure of Crystal Structure of Active Human Granzyme H, PDB code: 4gaw was solved by L.Wang, Q.Li, L.Wu, K.Zhang, L.Tong, F.Sun, Z.Fan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.80 / 3.00
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	170.369, 367.070, 61.137, 90.00, 90.00, 90.00
R / Rfree (%)	27.1 / 30.6

The binding sites of Chlorine atom in the Crystal Structure of Active Human Granzyme H (pdb code 4gaw). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Active Human Granzyme H, PDB code: 4gaw:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in the Crystal Structure of Active Human Granzyme H


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Active Human Granzyme H within 5.0Å range: probe atom residue distance (Å) B Occ C:Cl301 b:54.7 occ:1.00 OG C:SER197 2.8 51.1 1.0 NZ C:LYS42 3.3 63.0 1.0 CB C:SER197 3.7 50.1 1.0 CE1 C:HIS59 3.8 51.1 1.0 N C:GLY195 4.0 61.0 1.0 CA C:LYS194 4.1 62.9 1.0 NE2 C:HIS59 4.4 51.3 1.0 CG C:LYS194 4.5 68.4 1.0 C C:LYS194 4.6 61.2 1.0 CB C:LYS194 4.7 65.3 1.0 CE C:LYS42 4.7 62.4 1.0 ND1 C:HIS59 4.8 51.0 1.0 CA C:SER197 4.9 49.9 1.0 O C:PHE193 5.0 58.6 1.0

Chlorine binding site 2 out of 3 in the Crystal Structure of Active Human Granzyme H


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Active Human Granzyme H within 5.0Å range: probe atom residue distance (Å) B Occ D:Cl304 b:48.8 occ:1.00 OG D:SER197 3.1 42.5 1.0 N D:GLY195 3.6 44.5 1.0 CB D:SER197 4.0 41.8 1.0 NE2 D:HIS59 4.1 42.2 1.0 CA D:LYS194 4.4 45.8 1.0 C D:LYS194 4.5 45.2 1.0 CA D:GLY195 4.5 44.1 1.0 CE1 D:HIS59 4.8 42.0 1.0 CD2 D:HIS59 5.0 42.4 1.0

Chlorine binding site 3 out of 3 in the Crystal Structure of Active Human Granzyme H


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Active Human Granzyme H within 5.0Å range: probe atom residue distance (Å) B Occ I:Cl303 b:44.4 occ:1.00 OG I:SER197 3.7 39.8 1.0 NZ I:LYS42 3.7 44.7 1.0 N I:GLY195 3.8 39.8 1.0 CA I:LYS194 3.9 41.7 1.0 CG I:LYS194 3.9 46.1 1.0 CB I:LYS194 4.1 43.5 1.0 C I:LYS194 4.4 40.4 1.0 CB I:SER197 4.6 38.8 1.0 CD I:LYS194 4.7 48.7 1.0 CA I:GLY195 4.9 38.6 1.0 N I:LYS194 5.0 42.0 1.0

L.Wang, Q.Li, L.Wu, S.Liu, Y.Zhang, X.Yang, P.Zhu, H.Zhang, K.Zhang, J.Lou, P.Liu, L.Tong, F.Sun, Z.Fan. Identification of SERPINB1 As A Physiological Inhibitor of Human Granzyme H J.Immunol. V. 190 1319 2013.
ISSN: ISSN 0022-1767
PubMed: 23269243
DOI: 10.4049/JIMMUNOL.1202542