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Chlorine in PDB 4gxw: Crystal Structure of A COG1816 Amidohydrolase (Target Efi-505188) From Burkhoderia Ambifaria, with Bound Zn

Enzymatic activity of Crystal Structure of A COG1816 Amidohydrolase (Target Efi-505188) From Burkhoderia Ambifaria, with Bound Zn

All present enzymatic activity of Crystal Structure of A COG1816 Amidohydrolase (Target Efi-505188) From Burkhoderia Ambifaria, with Bound Zn:
3.5.4.4;

Protein crystallography data

The structure of Crystal Structure of A COG1816 Amidohydrolase (Target Efi-505188) From Burkhoderia Ambifaria, with Bound Zn, PDB code: 4gxw was solved by M.W.Vetting, A.M.Goble, L.L.Morisco, S.R.Wasserman, S.Sojitra, H.J.Imker, F.M.Raushel, J.A.Gerlt, S.C.Almo, Enzyme Function Initiative (Efi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.26 / 1.30
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 73.058, 66.223, 75.432, 90.00, 93.64, 90.00
R / Rfree (%) 16 / 18.1

Other elements in 4gxw:

The structure of Crystal Structure of A COG1816 Amidohydrolase (Target Efi-505188) From Burkhoderia Ambifaria, with Bound Zn also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A COG1816 Amidohydrolase (Target Efi-505188) From Burkhoderia Ambifaria, with Bound Zn (pdb code 4gxw). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of A COG1816 Amidohydrolase (Target Efi-505188) From Burkhoderia Ambifaria, with Bound Zn, PDB code: 4gxw:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4gxw

Go back to Chlorine Binding Sites List in 4gxw
Chlorine binding site 1 out of 2 in the Crystal Structure of A COG1816 Amidohydrolase (Target Efi-505188) From Burkhoderia Ambifaria, with Bound Zn


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A COG1816 Amidohydrolase (Target Efi-505188) From Burkhoderia Ambifaria, with Bound Zn within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl402

b:13.8
occ:1.00
 O B:HOH900 3.0 30.9 1.0
O B:HOH554 3.1 11.5 1.0
NH2 B:ARG272 3.2 12.3 1.0
O B:HOH738 3.2 28.4 1.0
NH1 B:ARG272 3.3 12.2 1.0
CE1 B:PHE219 3.7 13.0 1.0
CZ B:ARG272 3.7 11.0 1.0
N B:TYR269 3.8 10.0 1.0
CB B:SER268 3.8 10.8 1.0
CA B:GLY74 3.9 15.9 1.0
CD1 B:PHE219 4.0 12.7 1.0
CA B:TYR269 4.1 9.6 1.0
CB B:TYR269 4.2 11.2 1.0
C B:SER268 4.3 8.9 1.0
N B:GLY74 4.3 14.7 1.0
O B:HOH804 4.6 24.4 1.0
CA B:SER268 4.6 8.8 1.0
O B:HOH577 4.7 13.6 1.0
O B:HOH501 4.7 6.1 1.0
OG B:SER268 4.8 10.7 1.0
O B:HOH745 4.8 20.5 1.0
CZ B:PHE219 4.8 12.0 1.0
O B:SER268 4.9 10.5 1.0

Chlorine binding site 2 out of 2 in 4gxw

Go back to Chlorine Binding Sites List in 4gxw
Chlorine binding site 2 out of 2 in the Crystal Structure of A COG1816 Amidohydrolase (Target Efi-505188) From Burkhoderia Ambifaria, with Bound Zn


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A COG1816 Amidohydrolase (Target Efi-505188) From Burkhoderia Ambifaria, with Bound Zn within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl403

b:34.5
occ:1.00
 O B:HOH838 2.9 34.5 1.0
O B:HOH963 3.2 30.0 1.0
N B:ILE324 3.3 11.9 1.0
O B:HOH1011 3.3 30.7 1.0
CA B:THR323 3.6 12.2 1.0
CB B:THR323 3.6 12.7 1.0
CG1 B:ILE324 3.8 16.3 1.0
CE1 B:PHE317 3.8 15.8 1.0
O B:HOH666 3.9 17.3 1.0
C B:THR323 3.9 11.4 1.0
CG2 B:THR323 4.1 13.9 1.0
CB B:ILE324 4.2 16.4 1.0
CA B:ILE324 4.3 12.3 1.0
CZ B:PHE317 4.5 13.9 1.0
O B:HOH960 4.6 31.2 1.0
CD1 B:PHE317 4.7 15.0 1.0
CD1 B:ILE324 4.8 19.9 1.0
OG1 B:THR323 4.9 14.4 1.0
N B:THR323 4.9 11.6 1.0

Reference:

M.W.Vetting, A.M.Goble, L.L.Morisco, S.R.Wasserman, S.Sojitra, H.J.Imker, F.M.Raushel, J.A.Gerlt, S.C.Almo, Enzyme Function Initiative (Efi). Crystal Structure of A COG1816 Amidohydrolase (Target Efi-505188) From Burkhoderia Ambifaria, with Bound Zn To Be Published.
Page generated: Fri Jul 11 15:57:55 2025

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