Chlorine in PDB 4gyo: Crystal Structure of Rap Protein Complexed with Competence and Sporulation Factor

The structure of Crystal Structure of Rap Protein Complexed with Competence and Sporulation Factor, PDB code: 4gyo was solved by V.Parashar, M.B.Neiditch, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.00 / 2.16
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	86.725, 86.725, 225.805, 90.00, 90.00, 90.00
R / Rfree (%)	19 / 22.5

The binding sites of Chlorine atom in the Crystal Structure of Rap Protein Complexed with Competence and Sporulation Factor (pdb code 4gyo). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of Rap Protein Complexed with Competence and Sporulation Factor, PDB code: 4gyo:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Structure of Rap Protein Complexed with Competence and Sporulation Factor


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Rap Protein Complexed with Competence and Sporulation Factor within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl401 b:43.7 occ:1.00 O A:HOH503 3.1 26.3 1.0 N A:ARG178 3.4 23.5 1.0 CB A:ARG178 3.5 38.4 1.0 N A:ARG177 3.6 33.2 1.0 O A:HOH562 3.7 40.3 1.0 CA A:GLY176 3.8 34.5 1.0 C A:GLY176 3.9 36.8 1.0 CA A:ARG178 4.1 31.9 1.0 O A:HOH629 4.1 43.0 1.0 CD A:ARG178 4.2 29.6 1.0 CG A:ARG178 4.3 37.1 1.0 N A:GLY176 4.4 36.4 1.0 C A:ARG177 4.4 27.9 1.0 CD2 A:LEU174 4.4 61.4 1.0 CA A:ARG177 4.4 31.5 1.0 O A:GLY176 4.7 37.7 1.0 N A:ARG179 4.8 25.1 1.0 CB A:ARG177 4.8 29.5 1.0 CE1 A:TYR169 4.8 37.5 1.0 CG A:LEU174 4.9 61.7 1.0 O A:HOH505 4.9 29.6 1.0 C A:ARG178 5.0 35.5 1.0

Chlorine binding site 2 out of 2 in the Crystal Structure of Rap Protein Complexed with Competence and Sporulation Factor


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Rap Protein Complexed with Competence and Sporulation Factor within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl401 b:54.7 occ:1.00 O B:HOH544 2.7 34.3 1.0 N B:ARG178 3.4 28.8 1.0 CG B:ARG178 3.5 42.9 1.0 CB B:ARG178 3.6 32.9 1.0 N B:ARG177 3.6 34.1 1.0 CA B:GLY176 3.7 39.7 1.0 C B:GLY176 3.8 39.1 1.0 CA B:ARG178 4.1 28.1 1.0 N B:GLY176 4.4 47.3 1.0 C B:ARG177 4.4 31.6 1.0 CD2 B:LEU174 4.4 78.7 1.0 CA B:ARG177 4.4 34.3 1.0 CG B:LEU174 4.6 75.0 1.0 O B:GLY176 4.7 37.6 1.0 CE1 B:TYR169 4.7 33.8 1.0 CB B:ARG177 4.7 43.8 1.0 N B:ARG179 4.8 32.7 1.0 CD B:ARG178 4.9 38.3 1.0

V.Parashar, P.D.Jeffrey, M.B.Neiditch. Conformational Change-Induced Repeat Domain Expansion Regulates Rap Phosphatase Quorum-Sensing Signal Receptors. Plos Biol. V. 11 01512 2013.
ISSN: ISSN 1544-9173
PubMed: 23526881
DOI: 10.1371/JOURNAL.PBIO.1001512