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Chlorine in PDB 4hdf: Crystal Structure of Hiv-1 Protease Mutants V82A Complexed with Inhibitor Grl-0519

Enzymatic activity of Crystal Structure of Hiv-1 Protease Mutants V82A Complexed with Inhibitor Grl-0519

All present enzymatic activity of Crystal Structure of Hiv-1 Protease Mutants V82A Complexed with Inhibitor Grl-0519:
3.4.23.16;

Protein crystallography data

The structure of Crystal Structure of Hiv-1 Protease Mutants V82A Complexed with Inhibitor Grl-0519, PDB code: 4hdf was solved by H.Zhang, Y.-F.Wang, I.T.Weber, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 10.00 / 1.29
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 58.613, 86.148, 46.333, 90.00, 90.00, 90.00
R / Rfree (%) 16.3 / 20.9

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Hiv-1 Protease Mutants V82A Complexed with Inhibitor Grl-0519 (pdb code 4hdf). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Hiv-1 Protease Mutants V82A Complexed with Inhibitor Grl-0519, PDB code: 4hdf:

Chlorine binding site 1 out of 1 in 4hdf

Go back to Chlorine Binding Sites List in 4hdf
Chlorine binding site 1 out of 1 in the Crystal Structure of Hiv-1 Protease Mutants V82A Complexed with Inhibitor Grl-0519


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Hiv-1 Protease Mutants V82A Complexed with Inhibitor Grl-0519 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl101

b:30.8
occ:0.50
O B:HOH1057 3.6 34.1 1.0
NE2 B:HIS69 3.7 26.4 1.0
CD B:PRO1 4.2 27.9 1.0
CE1 B:HIS69 4.4 24.6 1.0
CD2 B:HIS69 4.8 23.1 1.0
N B:PRO1 4.8 22.7 1.0

Reference:

H.Zhang, Y.F.Wang, C.H.Shen, J.Agniswamy, K.V.Rao, C.X.Xu, A.K.Ghosh, R.W.Harrison, I.T.Weber. Novel P2 Tris-Tetrahydrofuran Group in Antiviral Compound 1 (Grl-0519) Fills the S2 Binding Pocket of Selected Mutants of Hiv-1 Protease. J.Med.Chem. V. 56 1074 2013.
ISSN: ISSN 0022-2623
PubMed: 23298236
DOI: 10.1021/JM301519Z
Page generated: Fri Jul 11 16:17:44 2025

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