Chlorine in PDB 4hhv: Crystal Structure of Ceramide Transfer Protein Pleckstrin Homology Domain

The structure of Crystal Structure of Ceramide Transfer Protein Pleckstrin Homology Domain, PDB code: 4hhv was solved by J.Prashek, T.Truong, X.Yao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	49.49 / 1.75
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	48.131, 54.979, 98.988, 90.00, 90.00, 90.00
R / Rfree (%)	17.9 / 20.4

The binding sites of Chlorine atom in the Crystal Structure of Ceramide Transfer Protein Pleckstrin Homology Domain (pdb code 4hhv). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 3 binding sites of Chlorine where determined in the Crystal Structure of Ceramide Transfer Protein Pleckstrin Homology Domain, PDB code: 4hhv:
Jump to Chlorine binding site number: 1; 2; 3;

Chlorine binding site 1 out of 3 in the Crystal Structure of Ceramide Transfer Protein Pleckstrin Homology Domain


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Ceramide Transfer Protein Pleckstrin Homology Domain within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl203 b:77.0 occ:1.00 O B:HOH323 3.0 27.9 1.0 O A:HOH399 3.2 43.8 1.0 O A:HOH322 3.5 28.9 1.0 OE2 B:GLU25 3.8 28.4 1.0 CG1 A:VAL46 4.0 18.1 1.0 O A:HOH384 4.1 55.7 1.0 O B:HOH319 4.1 35.7 1.0 NZ A:LYS48 4.1 26.2 1.0 O B:HOH332 4.2 39.3 1.0 CB B:LYS48 4.3 25.9 1.0 CD B:LYS48 4.4 30.9 1.0 CD A:LYS48 4.4 22.3 1.0 CG B:GLU25 4.5 23.8 1.0 O A:HOH380 4.5 41.1 1.0 CD B:GLU25 4.5 25.5 1.0 CG2 A:VAL46 4.6 19.1 1.0 O B:LEU47 4.6 21.4 1.0 CB B:GLU25 4.7 23.3 1.0 SG A:CYS27 4.8 28.8 1.0 CE A:LYS48 4.8 24.3 1.0 CB A:CYS27 4.8 21.6 1.0 CB A:VAL46 4.9 18.1 1.0 CG B:LYS48 5.0 27.9 1.0

Chlorine binding site 2 out of 3 in the Crystal Structure of Ceramide Transfer Protein Pleckstrin Homology Domain


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of Ceramide Transfer Protein Pleckstrin Homology Domain within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl204 b:74.4 occ:1.00 CB A:GLN100 3.3 24.4 1.0 O A:HOH345 4.1 47.3 1.0 CA A:GLN100 4.2 21.1 1.0 O A:HOH352 4.4 33.2 1.0 CG A:GLN100 4.5 26.6 1.0 CD A:GLN100 4.5 29.5 1.0 O A:HOH336 4.7 28.3 1.0 NE2 A:GLN100 4.8 32.4 1.0 OE1 A:GLN100 4.9 30.8 1.0

Chlorine binding site 3 out of 3 in the Crystal Structure of Ceramide Transfer Protein Pleckstrin Homology Domain


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of Ceramide Transfer Protein Pleckstrin Homology Domain within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl204 b:52.1 occ:1.00 CZ B:PHE81 3.4 85.2 1.0 CE1 B:PHE81 3.9 90.1 1.0 CE2 B:PHE81 4.2 79.0 1.0

J.Prashek, T.Truong, X.Yao. Crystal Structure of the Pleckstrin Homology Domain From the Ceramide Transfer Protein: Implications For Conformational Change Upon Ligand Binding. Plos One V. 8 79590 2013.
ISSN: ESSN 1932-6203
PubMed: 24260258
DOI: 10.1371/JOURNAL.PONE.0079590