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Chlorine in PDB 4hi6: Crystal Structure of H112W Mutant of Borna Disease Virus Matrix Protein

Protein crystallography data

The structure of Crystal Structure of H112W Mutant of Borna Disease Virus Matrix Protein, PDB code: 4hi6 was solved by P.Dautel, P.Kolenko, M.T.Stubbs, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.49 / 2.20
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 158.066, 158.066, 103.714, 90.00, 90.00, 120.00
R / Rfree (%) 21.9 / n/a

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of H112W Mutant of Borna Disease Virus Matrix Protein (pdb code 4hi6). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Crystal Structure of H112W Mutant of Borna Disease Virus Matrix Protein, PDB code: 4hi6:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in 4hi6

Go back to Chlorine Binding Sites List in 4hi6
Chlorine binding site 1 out of 5 in the Crystal Structure of H112W Mutant of Borna Disease Virus Matrix Protein


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of H112W Mutant of Borna Disease Virus Matrix Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl202

b:45.1
occ:1.00
O A:HOH312 2.7 40.4 1.0
N A:LYS11 3.2 32.2 1.0
O A:GLU9 3.4 36.0 1.0
CA A:LEU10 3.7 32.2 1.0
C A:LEU10 3.9 30.7 1.0
CB A:LYS11 3.9 30.2 1.0
CG1 A:VAL14 4.0 27.4 1.0
CA A:LYS11 4.1 31.4 1.0
CG A:LYS11 4.1 30.6 1.0
C A:GLU9 4.3 36.4 1.0
CD1 A:LEU10 4.4 33.9 1.0
CB A:PRO96 4.5 36.6 1.0
N A:LEU10 4.5 34.5 1.0
CD A:LYS11 4.6 31.5 1.0
O A:PRO96 4.6 35.0 1.0
O A:LYS11 4.6 35.2 1.0
C A:LYS11 4.8 31.2 1.0
CB A:LEU10 4.8 32.4 1.0
CG A:LEU10 4.9 31.8 1.0

Chlorine binding site 2 out of 5 in 4hi6

Go back to Chlorine Binding Sites List in 4hi6
Chlorine binding site 2 out of 5 in the Crystal Structure of H112W Mutant of Borna Disease Virus Matrix Protein


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of H112W Mutant of Borna Disease Virus Matrix Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl202

b:37.8
occ:1.00
N B:GLU9 3.4 31.2 1.0
CB B:GLU9 3.7 30.4 1.0
CE1 B:PHE102 3.9 34.9 1.0
CA B:VAL8 3.9 30.7 1.0
CZ B:PHE102 4.1 32.8 1.0
C B:VAL8 4.1 29.9 1.0
CA B:GLU9 4.2 31.2 1.0
O B:HOH331 4.3 39.7 1.0
O B:HOH330 4.4 34.3 1.0
CB B:VAL8 4.4 31.8 1.0
O B:TYR7 4.5 34.2 1.0
OE1 B:GLU9 4.6 33.3 1.0
CG1 B:VAL8 5.0 32.2 1.0
CG B:GLU9 5.0 31.7 1.0

Chlorine binding site 3 out of 5 in 4hi6

Go back to Chlorine Binding Sites List in 4hi6
Chlorine binding site 3 out of 5 in the Crystal Structure of H112W Mutant of Borna Disease Virus Matrix Protein


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of H112W Mutant of Borna Disease Virus Matrix Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl203

b:54.9
occ:1.00
N B:LYS13 3.2 38.0 1.0
CB B:LYS13 3.7 39.3 1.0
CB B:ASP12 3.7 33.9 1.0
N B:ASP12 3.8 33.1 1.0
CA B:LYS13 3.9 38.8 1.0
C B:ASP12 4.0 37.5 1.0
CB B:LYS11 4.0 34.2 1.0
CA B:ASP12 4.0 34.8 1.0
CG B:LYS13 4.1 42.2 1.0
CD B:LYS13 4.2 43.1 1.0
C B:LYS11 4.5 34.6 1.0
O B:HOH313 4.5 44.8 1.0
CD B:LYS11 4.6 35.8 1.0
CA B:LYS11 4.8 33.4 1.0
CG B:LYS11 4.9 35.8 1.0
CG B:ASP12 5.0 34.8 1.0

Chlorine binding site 4 out of 5 in 4hi6

Go back to Chlorine Binding Sites List in 4hi6
Chlorine binding site 4 out of 5 in the Crystal Structure of H112W Mutant of Borna Disease Virus Matrix Protein


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of H112W Mutant of Borna Disease Virus Matrix Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl201

b:47.9
occ:1.00
N C:LYS13 3.3 31.8 1.0
N C:ASP12 3.3 34.5 1.0
CB C:LYS11 3.6 39.1 1.0
CB C:ASP12 3.8 35.7 1.0
CB C:LYS13 3.9 32.9 1.0
CE C:LYS13 3.9 34.1 1.0
CA C:ASP12 3.9 35.5 1.0
CG C:LYS13 3.9 34.5 1.0
C C:ASP12 4.1 32.0 1.0
C C:LYS11 4.1 35.7 1.0
CA C:LYS13 4.2 32.9 1.0
CA C:LYS11 4.4 36.3 1.0
CD C:LYS13 4.5 34.3 1.0
CD C:LYS11 4.5 44.0 1.0
CG C:LYS11 4.7 40.8 1.0
CG C:ASP12 4.7 36.4 1.0
OD2 C:ASP12 4.8 38.1 1.0

Chlorine binding site 5 out of 5 in 4hi6

Go back to Chlorine Binding Sites List in 4hi6
Chlorine binding site 5 out of 5 in the Crystal Structure of H112W Mutant of Borna Disease Virus Matrix Protein


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of H112W Mutant of Borna Disease Virus Matrix Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl202

b:32.1
occ:1.00
O C:HOH303 3.1 35.1 1.0
CE2 C:PHE121 3.9 29.7 1.0
CD2 C:PHE121 4.1 29.8 1.0
CG1 C:VAL29 4.3 30.1 1.0

Reference:

P.Dautel, P.Kolenko, M.T.Stubbs. Matrix Protein Variants Provide Support For Alternative Borna Disease Virus Infection Pathway To Be Published.
Page generated: Sun Jul 21 15:52:42 2024

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