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Chlorine in PDB 4hnh: The Crystal Structure of A Short-Chain Dehydrogenases/Reductase (Wide Type) From Veillonella Parvula Dsm 2008 in Complex with Nadp

Protein crystallography data

The structure of The Crystal Structure of A Short-Chain Dehydrogenases/Reductase (Wide Type) From Veillonella Parvula Dsm 2008 in Complex with Nadp, PDB code: 4hnh was solved by K.Tan, C.Hatzos-Skintges, S.Clancy, A.Joachimiak, Midwest Center Forstructural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.00 / 1.58
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 109.219, 71.687, 65.016, 90.00, 121.44, 90.00
R / Rfree (%) 17.5 / 20.3

Chlorine Binding Sites:

The binding sites of Chlorine atom in the The Crystal Structure of A Short-Chain Dehydrogenases/Reductase (Wide Type) From Veillonella Parvula Dsm 2008 in Complex with Nadp (pdb code 4hnh). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the The Crystal Structure of A Short-Chain Dehydrogenases/Reductase (Wide Type) From Veillonella Parvula Dsm 2008 in Complex with Nadp, PDB code: 4hnh:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4hnh

Go back to Chlorine Binding Sites List in 4hnh
Chlorine binding site 1 out of 2 in the The Crystal Structure of A Short-Chain Dehydrogenases/Reductase (Wide Type) From Veillonella Parvula Dsm 2008 in Complex with Nadp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of The Crystal Structure of A Short-Chain Dehydrogenases/Reductase (Wide Type) From Veillonella Parvula Dsm 2008 in Complex with Nadp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl302

b:49.2
occ:1.00
N A:GLU55 3.0 18.9 1.0
NZ A:LYS63 3.4 53.9 1.0
CA A:ILE54 3.7 17.9 1.0
C A:ILE54 3.8 18.3 1.0
CB A:GLU55 3.9 23.0 1.0
CA A:GLU55 3.9 21.5 1.0
O A:GLU55 4.0 26.0 1.0
CG2 A:ILE54 4.1 18.1 1.0
CG A:GLU55 4.2 23.6 1.0
CE A:LYS38 4.3 47.5 1.0
O A:VAL53 4.3 21.5 1.0
C A:GLU55 4.5 25.5 1.0
CB A:ILE54 4.5 20.1 1.0
CE A:LYS63 4.7 52.1 1.0
OE1 A:GLU55 4.7 27.4 1.0
N A:ILE54 4.8 18.3 1.0
NZ A:LYS38 5.0 49.6 1.0
C A:VAL53 5.0 20.7 1.0
CD A:GLU55 5.0 27.2 1.0
CG1 A:ILE54 5.0 22.0 1.0

Chlorine binding site 2 out of 2 in 4hnh

Go back to Chlorine Binding Sites List in 4hnh
Chlorine binding site 2 out of 2 in the The Crystal Structure of A Short-Chain Dehydrogenases/Reductase (Wide Type) From Veillonella Parvula Dsm 2008 in Complex with Nadp


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of The Crystal Structure of A Short-Chain Dehydrogenases/Reductase (Wide Type) From Veillonella Parvula Dsm 2008 in Complex with Nadp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Cl303

b:23.4
occ:1.00
O B:HOH506 2.8 26.7 1.0
OG B:SER202 2.8 18.4 1.0
O B:HOH613 3.1 40.8 1.0
CD B:ARG136 3.2 24.3 1.0
CG B:ARG136 3.3 20.4 1.0
NH1 B:ARG140 3.4 16.3 1.0
CB B:SER202 3.6 17.0 1.0
CD B:ARG140 3.9 11.7 1.0
CG2 B:ILE148 4.0 12.7 1.0
CD B:ARG150 4.0 17.9 1.0
CD1 B:ILE148 4.1 13.3 1.0
CG B:ARG150 4.2 16.9 1.0
CZ B:ARG140 4.3 16.6 1.0
CB B:ARG136 4.4 18.4 1.0
NE B:ARG150 4.5 18.7 1.0
CB B:ILE148 4.5 12.0 1.0
NE B:ARG140 4.5 12.2 1.0
NE B:ARG136 4.6 23.5 1.0
O B:HOH485 4.8 36.4 1.0
CG1 B:ILE148 4.9 13.0 1.0
CA B:SER202 4.9 15.6 1.0
OG B:SER104 5.0 16.2 0.3

Reference:

K.Tan, C.Hatzos-Skintges, S.Clancy, A.Joachimiak. The Crystal Structure of A Short-Chain Dehydrogenases/Reductase (Wide Type) From Veillonella Parvula Dsm 2008 in Complex with Nadp. To Be Published.
Page generated: Sun Jul 21 15:58:06 2024

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