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Chlorine in PDB 4ied: Crystal Structure of Fus-1 (Oxa-85), A Class D Beta-Lactamase From Fusobacterium Nucleatum Subsp. Polymorphum

Enzymatic activity of Crystal Structure of Fus-1 (Oxa-85), A Class D Beta-Lactamase From Fusobacterium Nucleatum Subsp. Polymorphum

All present enzymatic activity of Crystal Structure of Fus-1 (Oxa-85), A Class D Beta-Lactamase From Fusobacterium Nucleatum Subsp. Polymorphum:
3.5.2.6;

Protein crystallography data

The structure of Crystal Structure of Fus-1 (Oxa-85), A Class D Beta-Lactamase From Fusobacterium Nucleatum Subsp. Polymorphum, PDB code: 4ied was solved by S.Mangani, M.Benvenuti, J.D.Docquier, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.59 / 1.50
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 43.945, 65.670, 91.698, 84.59, 82.91, 70.12
R / Rfree (%) 14.6 / 18.4

Other elements in 4ied:

The structure of Crystal Structure of Fus-1 (Oxa-85), A Class D Beta-Lactamase From Fusobacterium Nucleatum Subsp. Polymorphum also contains other interesting chemical elements:

Magnesium (Mg) 12 atoms
Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of Fus-1 (Oxa-85), A Class D Beta-Lactamase From Fusobacterium Nucleatum Subsp. Polymorphum (pdb code 4ied). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of Fus-1 (Oxa-85), A Class D Beta-Lactamase From Fusobacterium Nucleatum Subsp. Polymorphum, PDB code: 4ied:

Chlorine binding site 1 out of 1 in 4ied

Go back to Chlorine Binding Sites List in 4ied
Chlorine binding site 1 out of 1 in the Crystal Structure of Fus-1 (Oxa-85), A Class D Beta-Lactamase From Fusobacterium Nucleatum Subsp. Polymorphum


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of Fus-1 (Oxa-85), A Class D Beta-Lactamase From Fusobacterium Nucleatum Subsp. Polymorphum within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl303

b:12.0
occ:1.00
 O A:HOH419 2.9 5.8 1.0
O B:HOH413 2.9 5.6 1.0
OG A:SER92 2.9 5.5 1.0
OG B:SER92 3.0 4.7 1.0
CB A:SER92 3.5 5.5 1.0
CB B:SER92 3.5 4.6 1.0
CD1 B:LEU90 3.9 7.0 1.0
CD1 A:LEU90 3.9 7.2 1.0
CB B:LEU90 4.2 6.5 1.0
O B:HOH406 4.2 6.0 1.0
CD2 B:LEU90 4.2 8.2 1.0
CG B:LEU90 4.3 7.1 1.0
CB A:LEU90 4.3 6.9 1.0
O A:HOH410 4.4 6.0 1.0
CG A:LEU90 4.5 7.5 1.0
CA A:SER92 4.7 5.6 1.0
N A:SER92 4.7 5.9 1.0
CD2 A:LEU90 4.7 8.1 1.0
N B:SER92 4.7 4.8 1.0
CA B:SER92 4.7 4.6 1.0
CB B:VAL105 4.9 4.5 1.0
O B:VAL105 5.0 4.5 1.0
CB A:VAL105 5.0 5.1 1.0

Reference:

S.Mangani, M.Benvenuti, J.D.Docquier. Crystal Structure of Fus-1 (Oxa-85), A Class D Beta-Lactamase From Fusobacterium Nucleatum Subsp. Polymorphum To Be Published.
Page generated: Fri Jul 11 16:48:31 2025

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