Atomistry » Chlorine » PDB 4jka-4jth » 4jrf
Atomistry »
  Chlorine »
    PDB 4jka-4jth »
      4jrf »

Chlorine in PDB 4jrf: Crystal Structure of A Putative Cell Adhesion Protein (BACOVA_01548) From Bacteroides Ovatus Atcc 8483 at 1.98 A Resolution (Psi Community Target, Nakayama)

Protein crystallography data

The structure of Crystal Structure of A Putative Cell Adhesion Protein (BACOVA_01548) From Bacteroides Ovatus Atcc 8483 at 1.98 A Resolution (Psi Community Target, Nakayama), PDB code: 4jrf was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.38 / 1.98
Space group I 4
Cell size a, b, c (Å), α, β, γ (°) 134.022, 134.022, 57.730, 90.00, 90.00, 90.00
R / Rfree (%) 15.6 / 17.8

Other elements in 4jrf:

The structure of Crystal Structure of A Putative Cell Adhesion Protein (BACOVA_01548) From Bacteroides Ovatus Atcc 8483 at 1.98 A Resolution (Psi Community Target, Nakayama) also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Putative Cell Adhesion Protein (BACOVA_01548) From Bacteroides Ovatus Atcc 8483 at 1.98 A Resolution (Psi Community Target, Nakayama) (pdb code 4jrf). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 5 binding sites of Chlorine where determined in the Crystal Structure of A Putative Cell Adhesion Protein (BACOVA_01548) From Bacteroides Ovatus Atcc 8483 at 1.98 A Resolution (Psi Community Target, Nakayama), PDB code: 4jrf:
Jump to Chlorine binding site number: 1; 2; 3; 4; 5;

Chlorine binding site 1 out of 5 in 4jrf

Go back to Chlorine Binding Sites List in 4jrf
Chlorine binding site 1 out of 5 in the Crystal Structure of A Putative Cell Adhesion Protein (BACOVA_01548) From Bacteroides Ovatus Atcc 8483 at 1.98 A Resolution (Psi Community Target, Nakayama)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Putative Cell Adhesion Protein (BACOVA_01548) From Bacteroides Ovatus Atcc 8483 at 1.98 A Resolution (Psi Community Target, Nakayama) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl602

b:80.8
occ:1.00
N A:ASP289 3.2 41.4 1.0
O A:HOH991 3.2 57.0 1.0
CB A:ALA288 3.7 37.9 1.0
CG A:ASP289 3.8 61.0 1.0
CA A:ALA288 3.8 36.8 1.0
CB A:ASP289 3.9 45.9 1.0
OD1 A:ASP289 4.0 61.0 1.0
C A:ALA288 4.0 42.5 1.0
OD2 A:ASP289 4.1 69.1 1.0
CA A:ASP289 4.2 42.0 1.0

Chlorine binding site 2 out of 5 in 4jrf

Go back to Chlorine Binding Sites List in 4jrf
Chlorine binding site 2 out of 5 in the Crystal Structure of A Putative Cell Adhesion Protein (BACOVA_01548) From Bacteroides Ovatus Atcc 8483 at 1.98 A Resolution (Psi Community Target, Nakayama)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Putative Cell Adhesion Protein (BACOVA_01548) From Bacteroides Ovatus Atcc 8483 at 1.98 A Resolution (Psi Community Target, Nakayama) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl603

b:40.2
occ:0.65
CL A:CL603 0.0 40.2 0.7
CL A:CL603 2.2 37.6 0.3
N A:ALA146 3.1 22.5 1.0
CA A:GLY145 3.7 22.3 1.0
CB A:ALA146 3.8 22.9 1.0
C A:GLY145 3.8 26.0 1.0
CE1 A:PHE249 4.0 26.9 1.0
CA A:ALA146 4.0 22.3 1.0
O A:ALA146 4.7 23.5 1.0
CD1 A:PHE249 4.7 25.4 1.0
C A:ALA146 4.9 25.3 1.0
CZ A:PHE249 4.9 24.9 1.0
O A:HOH759 4.9 31.2 1.0
N A:GLY145 5.0 23.6 1.0

Chlorine binding site 3 out of 5 in 4jrf

Go back to Chlorine Binding Sites List in 4jrf
Chlorine binding site 3 out of 5 in the Crystal Structure of A Putative Cell Adhesion Protein (BACOVA_01548) From Bacteroides Ovatus Atcc 8483 at 1.98 A Resolution (Psi Community Target, Nakayama)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 3 of Crystal Structure of A Putative Cell Adhesion Protein (BACOVA_01548) From Bacteroides Ovatus Atcc 8483 at 1.98 A Resolution (Psi Community Target, Nakayama) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl603

b:37.6
occ:0.35
CL A:CL603 0.0 37.6 0.3
CL A:CL603 2.2 40.2 0.7
N A:ALA146 4.1 22.5 1.0
CB A:ALA146 4.3 22.9 1.0
O A:ALA146 4.3 23.5 1.0
O A:HOH717 4.6 26.1 1.0
CA A:ALA146 4.6 22.3 1.0
CA A:GLY145 4.8 22.3 1.0
C A:GLY145 4.9 26.0 1.0
C A:ALA146 4.9 25.3 1.0

Chlorine binding site 4 out of 5 in 4jrf

Go back to Chlorine Binding Sites List in 4jrf
Chlorine binding site 4 out of 5 in the Crystal Structure of A Putative Cell Adhesion Protein (BACOVA_01548) From Bacteroides Ovatus Atcc 8483 at 1.98 A Resolution (Psi Community Target, Nakayama)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 4 of Crystal Structure of A Putative Cell Adhesion Protein (BACOVA_01548) From Bacteroides Ovatus Atcc 8483 at 1.98 A Resolution (Psi Community Target, Nakayama) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl604

b:38.0
occ:1.00
O A:HOH815 3.1 37.6 1.0
N A:TYR305 3.3 23.4 1.0
CA A:LYS304 3.7 27.4 1.0
CD2 A:LEU151 3.8 30.9 1.0
CD2 A:TYR305 3.8 24.2 1.0
CB A:LYS304 3.9 26.8 1.0
C A:LYS304 4.0 28.3 1.0
O A:TYR305 4.0 27.3 1.0
CG A:LYS304 4.1 34.4 1.0
CA A:TYR305 4.3 22.7 1.0
CE A:LYS159 4.3 52.0 1.0
CB A:TYR305 4.4 22.8 1.0
CG A:TYR305 4.5 23.3 1.0
CE2 A:TYR305 4.6 24.7 1.0
C A:TYR305 4.6 26.7 1.0
O A:SER303 4.6 31.2 1.0
CD A:LYS159 4.9 44.8 1.0
O A:HOH728 4.9 26.6 1.0
N A:LYS304 4.9 28.2 1.0
CD A:LYS304 5.0 32.0 1.0

Chlorine binding site 5 out of 5 in 4jrf

Go back to Chlorine Binding Sites List in 4jrf
Chlorine binding site 5 out of 5 in the Crystal Structure of A Putative Cell Adhesion Protein (BACOVA_01548) From Bacteroides Ovatus Atcc 8483 at 1.98 A Resolution (Psi Community Target, Nakayama)


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 5 of Crystal Structure of A Putative Cell Adhesion Protein (BACOVA_01548) From Bacteroides Ovatus Atcc 8483 at 1.98 A Resolution (Psi Community Target, Nakayama) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl605

b:73.7
occ:1.00
O A:HOH750 3.5 30.5 1.0
NH1 A:ARG205 3.6 36.2 1.0
CD A:ARG205 3.7 35.4 1.0
CG A:ARG205 3.9 35.0 1.0
SE A:MSE207 3.9 55.6 0.4
CB A:ARG205 4.0 32.4 1.0
O A:HOH909 4.1 46.5 1.0
O A:HOH888 4.3 44.4 1.0
O A:HOH1033 4.3 68.0 1.0
CB A:SER45 4.5 35.3 1.0
O A:HOH1019 4.5 59.6 1.0
CZ A:ARG205 4.6 51.0 1.0
NE A:ARG205 4.6 43.7 1.0
CG1 A:ILE95 4.7 35.9 1.0
OG A:SER45 4.8 45.5 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Fri Jul 11 17:27:28 2025

Last articles

Mg in 4R7F
Mg in 4R65
Mg in 4R4V
Mg in 4R5X
Mg in 4R4S
Mg in 4R5Q
Mg in 4R4D
Mg in 4R4R
Mg in 4R18
Mg in 4R17
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy