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Chlorine in PDB 4k7x: Crystal Structure of A 4-Hydroxyproline Epimerase From Burkholderia Multivorans, Target Efi-506479, with Bound Phosphate, Closed Domains

Enzymatic activity of Crystal Structure of A 4-Hydroxyproline Epimerase From Burkholderia Multivorans, Target Efi-506479, with Bound Phosphate, Closed Domains

All present enzymatic activity of Crystal Structure of A 4-Hydroxyproline Epimerase From Burkholderia Multivorans, Target Efi-506479, with Bound Phosphate, Closed Domains:
5.1.1.4;

Protein crystallography data

The structure of Crystal Structure of A 4-Hydroxyproline Epimerase From Burkholderia Multivorans, Target Efi-506479, with Bound Phosphate, Closed Domains, PDB code: 4k7x was solved by M.W.Vetting, R.Toro, R.Bhosle, N.F.Al Obaidi, L.L.Morisco, S.R.Wasserman, S.Sojitra, M.Stead, E.Washington, A.Scott Glenn, S.Chowdhury, B.Evans, J.Hammonds, B.Hillerich, J.Love, R.D.Seidel, H.J.Imker, J.A.Gerlt, S.C.Almo, Enzyme Function Initiative (Efi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.78 / 1.75
Space group I 41 2 2
Cell size a, b, c (Å), α, β, γ (°) 114.885, 114.885, 173.699, 90.00, 90.00, 90.00
R / Rfree (%) 13.7 / 15.6

Other elements in 4k7x:

The structure of Crystal Structure of A 4-Hydroxyproline Epimerase From Burkholderia Multivorans, Target Efi-506479, with Bound Phosphate, Closed Domains also contains other interesting chemical elements:

Sodium (Na) 1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A 4-Hydroxyproline Epimerase From Burkholderia Multivorans, Target Efi-506479, with Bound Phosphate, Closed Domains (pdb code 4k7x). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Crystal Structure of A 4-Hydroxyproline Epimerase From Burkholderia Multivorans, Target Efi-506479, with Bound Phosphate, Closed Domains, PDB code: 4k7x:

Chlorine binding site 1 out of 1 in 4k7x

Go back to Chlorine Binding Sites List in 4k7x
Chlorine binding site 1 out of 1 in the Crystal Structure of A 4-Hydroxyproline Epimerase From Burkholderia Multivorans, Target Efi-506479, with Bound Phosphate, Closed Domains


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A 4-Hydroxyproline Epimerase From Burkholderia Multivorans, Target Efi-506479, with Bound Phosphate, Closed Domains within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl406

b:28.0
occ:1.00
HZ3 A:LYS3 2.4 27.1 1.0
HZ2 A:LYS3 2.7 27.1 1.0
OD1 A:ASP301 2.8 12.6 1.0
HG22 A:ILE299 2.8 17.1 1.0
O A:ILE299 2.8 9.4 1.0
HA A:ASP301 2.9 12.8 1.0
NZ A:LYS3 2.9 22.6 1.0
HD2 A:ARG306 3.1 20.9 1.0
HG3 A:LYS3 3.1 13.3 1.0
HD2 A:LYS3 3.2 16.2 1.0
HZ1 A:LYS3 3.5 27.1 1.0
H A:LYS3 3.6 13.7 1.0
CA A:ASP301 3.6 10.7 1.0
N A:ASP301 3.7 10.0 1.0
CG2 A:ILE299 3.7 14.2 1.0
C A:ILE299 3.8 8.0 1.0
CD A:LYS3 3.8 13.5 1.0
CG A:ASP301 3.8 12.3 1.0
CG A:LYS3 3.8 11.1 1.0
C A:GLU300 3.8 13.5 1.0
HA A:MET2 3.9 15.2 1.0
HG21 A:ILE299 3.9 17.1 1.0
CE A:LYS3 3.9 19.6 1.0
HB A:ILE299 4.0 11.3 1.0
H A:ASP301 4.0 12.0 1.0
CD A:ARG306 4.0 17.4 1.0
O A:GLU300 4.0 9.6 1.0
HB2 A:LYS3 4.1 12.5 1.0
N A:LYS3 4.3 11.4 1.0
CB A:ASP301 4.3 11.8 1.0
HD3 A:ARG306 4.3 20.9 1.0
CB A:ILE299 4.3 9.4 1.0
HG23 A:ILE299 4.3 17.1 1.0
HB2 A:ARG306 4.4 15.4 1.0
HE2 A:LYS3 4.4 23.6 1.0
HZ2 A:TRP307 4.4 18.9 1.0
N A:GLU300 4.5 9.6 1.0
CB A:LYS3 4.5 10.4 1.0
HE A:ARG306 4.5 22.1 1.0
HA A:GLU300 4.6 12.4 1.0
CA A:GLU300 4.6 10.3 1.0
HG2 A:LYS3 4.6 13.3 1.0
HE3 A:LYS3 4.6 23.6 1.0
CA A:ILE299 4.7 7.3 1.0
HD3 A:LYS3 4.7 16.2 1.0
HB3 A:ASP301 4.7 14.1 1.0
NE A:ARG306 4.7 18.4 1.0
CZ2 A:TRP307 4.7 15.8 1.0
CA A:MET2 4.8 12.7 1.0
HG3 A:ARG306 4.8 16.4 1.0
OD2 A:ASP301 4.8 13.5 1.0
C A:ASP301 4.9 10.8 1.0
CG A:ARG306 4.9 13.7 1.0
C A:MET2 4.9 12.2 1.0

Reference:

M.W.Vetting, R.Toro, R.Bhosle, N.F.Al Obaidi, L.L.Morisco, S.R.Wasserman, S.Sojitra, M.Stead, E.Washington, A.Scott Glenn, S.Chowdhury, B.Evans, J.Hammonds, B.Hillerich, J.Love, R.D.Seidel, H.J.Imker, J.A.Gerlt, S.C.Almo, Enzyme Function Initiative (Efi). Crystal Structure of A 4-Hydroxyproline Epimerase From Burkholderia Multivorans, Target Efi-506479, with Bound Phosphate, Closed Domains To Be Published.
Page generated: Sun Jul 21 18:03:05 2024

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