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Chlorine in PDB 4l8k: Crystal Structure of A Putative Peptidase (PARMER_02772) From Parabacteroides Merdae Atcc 43184 at 2.26 A Resolution

Protein crystallography data

The structure of Crystal Structure of A Putative Peptidase (PARMER_02772) From Parabacteroides Merdae Atcc 43184 at 2.26 A Resolution, PDB code: 4l8k was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.65 / 2.26
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 42.333, 131.213, 129.056, 90.00, 90.55, 90.00
R / Rfree (%) 15.9 / 20.6

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of A Putative Peptidase (PARMER_02772) From Parabacteroides Merdae Atcc 43184 at 2.26 A Resolution (pdb code 4l8k). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of A Putative Peptidase (PARMER_02772) From Parabacteroides Merdae Atcc 43184 at 2.26 A Resolution, PDB code: 4l8k:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4l8k

Go back to Chlorine Binding Sites List in 4l8k
Chlorine binding site 1 out of 2 in the Crystal Structure of A Putative Peptidase (PARMER_02772) From Parabacteroides Merdae Atcc 43184 at 2.26 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of A Putative Peptidase (PARMER_02772) From Parabacteroides Merdae Atcc 43184 at 2.26 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl404

b:60.7
occ:1.00
N A:GLU152 3.3 21.8 1.0
O A:HOH504 3.6 18.7 1.0
O A:HOH658 3.7 35.8 1.0
N A:ASN153 3.7 27.9 1.0
CB A:GLU152 4.0 24.8 1.0
CA A:GLY151 4.0 20.9 1.0
C A:GLY151 4.1 25.1 1.0
CA A:GLU152 4.1 23.2 1.0
ND2 A:ASN153 4.1 46.6 1.0
CG A:ASN153 4.2 42.3 1.0
CG A:GLU152 4.4 28.4 1.0
C A:GLU152 4.4 28.4 1.0
CB A:ASN153 4.5 29.1 1.0
CA A:ASN153 4.7 27.2 1.0
OD1 A:ASN153 4.7 31.5 1.0

Chlorine binding site 2 out of 2 in 4l8k

Go back to Chlorine Binding Sites List in 4l8k
Chlorine binding site 2 out of 2 in the Crystal Structure of A Putative Peptidase (PARMER_02772) From Parabacteroides Merdae Atcc 43184 at 2.26 A Resolution


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of A Putative Peptidase (PARMER_02772) From Parabacteroides Merdae Atcc 43184 at 2.26 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Cl407

b:65.7
occ:1.00
CA C:LYS166 3.6 26.9 1.0
O C:CYS165 3.9 25.6 1.0
CZ C:ARG229 4.0 43.4 1.0
CG C:LYS166 4.1 45.3 1.0
NH1 C:ARG229 4.1 36.7 1.0
NE C:ARG229 4.1 30.9 1.0
N C:LYS166 4.1 26.5 1.0
C C:CYS165 4.3 28.5 1.0
CB C:LYS166 4.3 30.6 1.0
CD C:ARG229 4.3 28.7 1.0
NH2 C:ARG229 4.5 32.4 1.0
O C:LYS166 4.5 31.8 1.0
C C:LYS166 4.5 31.6 1.0
O C:HOH673 4.8 46.7 1.0
O C:GLU164 4.8 34.0 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Fri Jul 11 18:08:19 2025

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