Chlorine in PDB 4lxt: Crystal Structure Wlard, A Sugar 3N-Formyl Transferase in the Presence of Dtdp-QUI3N and 5-N-Formyl-Thf

The structure of Crystal Structure Wlard, A Sugar 3N-Formyl Transferase in the Presence of Dtdp-QUI3N and 5-N-Formyl-Thf, PDB code: 4lxt was solved by J.B.Thoden, M.-F.Goneau, M.Gilbert, H.M.Holden, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.00 / 1.40
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	96.775, 65.148, 134.718, 90.00, 110.51, 90.00
R / Rfree (%)	17.7 / 20.6

The binding sites of Chlorine atom in the Crystal Structure Wlard, A Sugar 3N-Formyl Transferase in the Presence of Dtdp-QUI3N and 5-N-Formyl-Thf (pdb code 4lxt). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure Wlard, A Sugar 3N-Formyl Transferase in the Presence of Dtdp-QUI3N and 5-N-Formyl-Thf, PDB code: 4lxt:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in the Crystal Structure Wlard, A Sugar 3N-Formyl Transferase in the Presence of Dtdp-QUI3N and 5-N-Formyl-Thf


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure Wlard, A Sugar 3N-Formyl Transferase in the Presence of Dtdp-QUI3N and 5-N-Formyl-Thf within 5.0Å range: probe atom residue distance (Å) B Occ A:Cl309 b:16.9 occ:1.00 NZ A:LYS9 3.2 12.0 1.0 O A:HOH475 3.2 15.7 1.0 O A:HOH522 3.3 17.0 1.0 ND2 A:ASN35 3.3 9.2 1.0 O A:HOH472 3.4 17.4 1.0 ND2 A:ASN37 3.6 25.2 1.0 CE A:LYS9 3.7 11.7 1.0 OD1 A:ASN37 4.0 17.1 1.0 C6Q A:T3Q305 4.0 15.8 1.0 CG A:ASN37 4.0 17.6 1.0 CB A:ASP79 4.0 12.6 1.0 CD A:LYS9 4.1 8.7 1.0 CG A:ASN35 4.3 11.2 1.0 CB A:ASN35 4.4 9.9 1.0 O A:HOH562 4.6 19.6 1.0 OD1 A:ASP79 4.7 14.8 1.0 CG A:ASP79 4.8 12.6 1.0 O2A A:T3Q305 5.0 10.8 1.0 O A:HOH863 5.0 32.8 1.0

Chlorine binding site 2 out of 2 in the Crystal Structure Wlard, A Sugar 3N-Formyl Transferase in the Presence of Dtdp-QUI3N and 5-N-Formyl-Thf


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure Wlard, A Sugar 3N-Formyl Transferase in the Presence of Dtdp-QUI3N and 5-N-Formyl-Thf within 5.0Å range: probe atom residue distance (Å) B Occ B:Cl306 b:21.7 occ:1.00 NZ B:LYS9 3.1 13.8 1.0 O B:HOH538 3.2 21.2 1.0 O B:HOH523 3.3 21.0 1.0 O B:HOH482 3.3 21.0 1.0 ND2 B:ASN35 3.3 13.6 1.0 ND2 B:ASN37 3.5 31.3 1.0 CE B:LYS9 3.7 12.4 1.0 OD1 B:ASN37 3.9 24.5 1.0 C6Q B:T3Q303 4.0 20.1 1.0 CG B:ASN37 4.0 24.4 1.0 CB B:ASP79 4.1 14.7 1.0 CD B:LYS9 4.1 11.1 1.0 CG B:ASN35 4.3 14.2 1.0 CB B:ASN35 4.4 13.8 1.0 O B:HOH544 4.5 22.4 1.0 OD1 B:ASP79 4.6 18.3 1.0 CG B:ASP79 4.9 15.6 1.0 O2A B:T3Q303 4.9 12.9 1.0 O B:HOH462 4.9 20.1 1.0 O B:HOH804 4.9 41.0 1.0

J.B.Thoden, M.F.Goneau, M.Gilbert, H.M.Holden. Structure of A Sugar N-Formyltransferase From Campylobacter Jejuni. Biochemistry V. 52 6114 2013.
ISSN: ISSN 0006-2960
PubMed: 23898784
DOI: 10.1021/BI4009006