Chlorine in PDB 4m4k: Crystal Structure of the Drosphila Beta,14GALACTOSYLTRANSFERASE 7 Mutant D211N Complex with Manganese, Udp-Gal and Xylobiose

Enzymatic activity of Crystal Structure of the Drosphila Beta,14GALACTOSYLTRANSFERASE 7 Mutant D211N Complex with Manganese, Udp-Gal and Xylobiose

All present enzymatic activity of Crystal Structure of the Drosphila Beta,14GALACTOSYLTRANSFERASE 7 Mutant D211N Complex with Manganese, Udp-Gal and Xylobiose:
2.4.1.133;

Protein crystallography data

The structure of Crystal Structure of the Drosphila Beta,14GALACTOSYLTRANSFERASE 7 Mutant D211N Complex with Manganese, Udp-Gal and Xylobiose, PDB code: 4m4k was solved by B.Ramakrishnan, P.K.Qasba, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	36.98 / 2.20
*Space group*	P 4₃ 2₁ 2
*Cell size a, b, c (Å), α, β, γ (°)*	82.680, 82.680, 131.486, 90.00, 90.00, 90.00
*R / R_free (%)*	18.7 / 21.3

Other elements in 4m4k:

The structure of Crystal Structure of the Drosphila Beta,14GALACTOSYLTRANSFERASE 7 Mutant D211N Complex with Manganese, Udp-Gal and Xylobiose also contains other interesting chemical elements:

Manganese

(Mn)

1 atom

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Crystal Structure of the Drosphila Beta,14GALACTOSYLTRANSFERASE 7 Mutant D211N Complex with Manganese, Udp-Gal and Xylobiose (pdb code 4m4k). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total 2 binding sites of Chlorine where determined in the Crystal Structure of the Drosphila Beta,14GALACTOSYLTRANSFERASE 7 Mutant D211N Complex with Manganese, Udp-Gal and Xylobiose, PDB code: 4m4k:
Jump to Chlorine binding site number: 1; 2;

Chlorine binding site 1 out of 2 in 4m4k

Go back to

Chlorine Binding Sites List in 4m4k

Chlorine binding site 1 out of 2 in the Crystal Structure of the Drosphila Beta,14GALACTOSYLTRANSFERASE 7 Mutant D211N Complex with Manganese, Udp-Gal and Xylobiose

Mono view

Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Crystal Structure of the Drosphila Beta,14GALACTOSYLTRANSFERASE 7 Mutant D211N Complex with Manganese, Udp-Gal and Xylobiose within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Cl405 b:71.3 occ:1.00	O	A:ARG263	3.8	56.0	1.0
	C	A:ARG263	4.3	53.6	1.0
	CA	A:GLU213	4.5	42.8	1.0
	N	A:GLU213	4.6	40.9	1.0
	O	A:ASP212	4.7	46.8	1.0
	C	A:ASP212	4.7	44.1	1.0
	CB	A:GLU213	4.7	37.7	1.0
	CA	A:ARG263	4.8	53.9	1.0
	CB	A:ASP212	4.8	42.2	1.0
	O	A:THR262	4.9	47.2	1.0
	N	A:LYS264	4.9	52.4	1.0
	CG2	A:VAL216	5.0	42.2	1.0
	CG	A:GLU213	5.0	40.7	1.0

Chlorine binding site 2 out of 2 in 4m4k

Go back to

Chlorine Binding Sites List in 4m4k

Chlorine binding site 2 out of 2 in the Crystal Structure of the Drosphila Beta,14GALACTOSYLTRANSFERASE 7 Mutant D211N Complex with Manganese, Udp-Gal and Xylobiose

Mono view

Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 2 of Crystal Structure of the Drosphila Beta,14GALACTOSYLTRANSFERASE 7 Mutant D211N Complex with Manganese, Udp-Gal and Xylobiose within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Cl406 b:80.1 occ:1.00	O	A:HOH616	3.8	56.7	1.0
	NH1	A:ARG227	3.9	46.1	1.0
	CB	A:ARG227	4.0	48.8	1.0
	CD	A:ARG227	4.0	47.4	1.0
	CG	A:ARG227	4.1	46.8	1.0
	O	A:HOH600	4.1	52.5	1.0
	NE2	A:GLN229	4.2	62.6	1.0
	N	A:ARG227	4.5	50.3	1.0
	CA	A:ARG227	4.8	52.0	1.0
	CZ	A:ARG227	4.9	46.6	1.0
	NE	A:ARG227	4.9	46.7	1.0

Reference:

Y.Tsutsui, B.Ramakrishnan, P.K.Qasba. Crystal Structures of Beta-1,4-Galactosyltransferase 7 Enzyme Reveal Conformational Changes and Substrate Binding. J.Biol.Chem. V. 288 31963 2013.
ISSN: ISSN 0021-9258
PubMed: 24052259
DOI: 10.1074/JBC.M113.509984

Page generated: Fri Jul 11 18:55:42 2025

Last articles

Mg in 3ZHV
Mg in 3ZHU
Mg in 3ZHT
Mg in 3ZI8
Mg in 3ZI4
Mg in 3ZGZ
Mg in 3ZHS
Mg in 3ZHR
Mg in 3ZHQ
Mg in 3ZC0

	© Copyright 2008-2020 by atomistry.com
Home \| Site Map \| Copyright \| Contact us \| Privacy