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Chlorine in PDB 4ncg: Discovery of Doravirine, An Orally Bioavailable Non-Nucleoside Reverse Transcriptase Inhibitor Potent Against A Wide Range of Resistant Mutant Hiv Viruses

Enzymatic activity of Discovery of Doravirine, An Orally Bioavailable Non-Nucleoside Reverse Transcriptase Inhibitor Potent Against A Wide Range of Resistant Mutant Hiv Viruses

All present enzymatic activity of Discovery of Doravirine, An Orally Bioavailable Non-Nucleoside Reverse Transcriptase Inhibitor Potent Against A Wide Range of Resistant Mutant Hiv Viruses:
2.7.7.49; 2.7.7.7; 3.1.13.2; 3.1.26.13;

Protein crystallography data

The structure of Discovery of Doravirine, An Orally Bioavailable Non-Nucleoside Reverse Transcriptase Inhibitor Potent Against A Wide Range of Resistant Mutant Hiv Viruses, PDB code: 4ncg was solved by Y.Yan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.01 / 2.58
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 118.385, 153.618, 154.624, 90.00, 90.00, 90.00
R / Rfree (%) 21.7 / 26

Other elements in 4ncg:

The structure of Discovery of Doravirine, An Orally Bioavailable Non-Nucleoside Reverse Transcriptase Inhibitor Potent Against A Wide Range of Resistant Mutant Hiv Viruses also contains other interesting chemical elements:

Fluorine (F) 3 atoms

Chlorine Binding Sites:

The binding sites of Chlorine atom in the Discovery of Doravirine, An Orally Bioavailable Non-Nucleoside Reverse Transcriptase Inhibitor Potent Against A Wide Range of Resistant Mutant Hiv Viruses (pdb code 4ncg). This binding sites where shown within 5.0 Angstroms radius around Chlorine atom.
In total only one binding site of Chlorine was determined in the Discovery of Doravirine, An Orally Bioavailable Non-Nucleoside Reverse Transcriptase Inhibitor Potent Against A Wide Range of Resistant Mutant Hiv Viruses, PDB code: 4ncg:

Chlorine binding site 1 out of 1 in 4ncg

Go back to Chlorine Binding Sites List in 4ncg
Chlorine binding site 1 out of 1 in the Discovery of Doravirine, An Orally Bioavailable Non-Nucleoside Reverse Transcriptase Inhibitor Potent Against A Wide Range of Resistant Mutant Hiv Viruses


Mono view


Stereo pair view

A full contact list of Chlorine with other atoms in the Cl binding site number 1 of Discovery of Doravirine, An Orally Bioavailable Non-Nucleoside Reverse Transcriptase Inhibitor Potent Against A Wide Range of Resistant Mutant Hiv Viruses within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Cl601

b:63.1
occ:1.00
CL A:2KW601 0.0 63.1 1.0
C A:2KW601 1.7 69.2 1.0
C1 A:2KW601 2.6 69.7 1.0
C5 A:2KW601 2.7 70.8 1.0
CH2 A:TRP229 3.8 72.8 1.0
CB A:PRO95 3.9 61.4 1.0
C2 A:2KW601 3.9 66.6 1.0
CZ2 A:TRP229 3.9 72.8 1.0
CZ3 A:TRP229 4.0 72.4 1.0
C4 A:2KW601 4.0 68.4 1.0
CD2 A:TYR188 4.0 67.8 1.0
CD2 A:LEU100 4.1 55.4 1.0
CE2 A:TRP229 4.2 73.8 1.0
CD1 A:LEU100 4.2 55.5 1.0
CE3 A:TRP229 4.2 71.5 1.0
CG A:PRO95 4.3 65.9 1.0
CE2 A:TYR188 4.3 68.2 1.0
CD2 A:TRP229 4.3 70.6 1.0
C3 A:2KW601 4.5 67.0 1.0
CD2 A:TYR181 4.5 71.4 1.0
CG A:LEU100 4.6 55.5 1.0
CE2 A:TYR181 4.8 72.7 1.0
CD1 A:LEU234 4.9 69.4 1.0
CG A:TYR188 4.9 67.0 1.0
CG A:TYR181 4.9 69.6 1.0
NE1 A:TRP229 5.0 72.2 1.0

Reference:

B.Cote, J.D.Burch, E.Asante-Appiah, C.Bayly, L.Bedard, M.Blouin, L.C.Campeau, E.Cauchon, M.Chan, A.Chefson, N.Coulombe, W.Cromlish, S.Debnath, D.Deschenes, K.Dupont-Gaudet, J.P.Falgueyret, R.Forget, S.Gagne, D.Gauvreau, M.Girardin, S.Guiral, E.Langlois, C.S.Li, N.Nguyen, R.Papp, S.Plamondon, A.Roy, S.Roy, R.Seliniotakis, M.St-Onge, S.Ouellet, P.Tawa, J.F.Truchon, J.Vacca, M.Wrona, Y.Yan, Y.Ducharme. Discovery of Mk-1439, An Orally Bioavailable Non-Nucleoside Reverse Transcriptase Inhibitor Potent Against A Wide Range of Resistant Mutant Hiv Viruses. Bioorg.Med.Chem.Lett. V. 24 917 2014.
ISSN: ISSN 0960-894X
PubMed: 24412110
DOI: 10.1016/J.BMCL.2013.12.070
Page generated: Sun Jul 21 20:38:13 2024

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